PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3EO1

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	L1	12	L1-12-1	26	RASQSLGSSYLA	BPABPBPABDBB
A	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	87.5	L2	8	L2-8-*	-1	YGASSRAP	BGBLBPPP
A	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYADSPIT	BBDABPpPB
B	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	76.9	H1	13	H1-13-3	34	KASGYTFSSNVIS	PBPGADAADBPBB
B	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	60	H2	10	H2-10-3	24	GVIPIVDIAN	BBBPGALBBB
B	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV	-1	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BPPADPABBPBDB
D	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLGSSYLA	BPAPPDGBLDBB
D	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	87.5	L2	8	L2-8-*	-1	YGASSRAP	BGBLBPPP
D	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	18	QQYADSPIT	BBDABPpPB
E	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	76.9	H1	13	H1-13-3	39	KASGYTFSSNVIS	BPPGAPDAABBBB
E	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	60	H2	10	H2-10-3	29	GVIPIVDIAN	BBBPLALBPB
E	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV	-1	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBPABPABBBPDB
G	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	L1	12	L1-12-1	26	RASQSLGSSYLA	BPABPBPABDBB
G	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	87.5	L2	8	L2-8-*	-1	YGASSRAP	BGBLBPPP
G	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYADSPIT	BBDABPpPB
H	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	76.9	H1	13	H1-13-3	34	KASGYTFSSNVIS	PBPGADAADBPBB
H	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	60	H2	10	H2-10-3	24	GVIPIVDIAN	BBBPGALBBB
H	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV	-1	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BPPADPABBPBDB
J	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSLGSSYLA	BPAPPDGBLDBB
J	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	87.5	L2	8	L2-8-*	-1	YGASSRAP	BGBLBPPP
J	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	18	QQYADSPIT	BBDABPpPB
K	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	76.9	H1	13	H1-13-3	39	KASGYTFSSNVIS	BPPGAPDAABBBB
K	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	60	H2	10	H2-10-3	29	GVIPIVDIAN	BBBPLALBPB
K	heavy	Mus.musculus	Hu_IGHV1-69*01	95.9	Hu_IGHV	-1	H3	13	H3-13-*	-1	ASTLGLVLDAMDY	BBPABPABBBPDB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019