PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDR Structures for L1-12-*

Structures in cluster L1-12-*
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
L1-12-*	1FIGL	3	kappa	Mus.musculus	Mo_IGKV4-57-1*01	97.1	Mo_IGKV4-57-1*01	91.7	RASSSVSSTYLH	PBBGBPADLBBB	-1
L1-12-*	3EO0A	1.75	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BPABPDGDDABB	-1
L1-12-*	3EO0C	1.75	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BPABPDGDBLBB	-1
L1-12-*	3EO1D	3.1	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BPAPPDGBLDBB	-1
L1-12-*	3EO1J	3.1	kappa	Mus.musculus	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BPAPPDGBLDBB	-1
L1-12-*	3W2DL	3.1	kappa	Mus.musculus	Mo_IGKV4-57-1*01	98.5	Mo_IGKV4-57-1*01	83.3	RATSSVSSTYLH	PPPGGPPAADBB	-1
L1-12-*	3W9DD	2.32	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSVTSSQLA	BPABPBGBGLBB	-1
L1-12-*	4DW2L	2.97	kappa	Mus.musculus	Mo_IGKV4-57-1*01	98.5	Mo_IGKV4-57-1*01	75	RASSTVSFHYLH	BPBLGBPAADPB	-1
L1-12-*	4IDJL	3.36	kappa	Homo.sapiens	Hu_IGKV3-20*01	97	Hu_IGKV3-20*01	50	RASQTISNNFVA	BBABPAGDPLBB	-1
L1-12-*	4KV5F	3	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BBABPDGDDDBB	-1
L1-12-*	4KV5I	3	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BBABPDGDDDBB	-1
L1-12-*	4KV5K	3	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BBABPDGDDDBB	-1
L1-12-*	4KV5L	3	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BBABPDGDDDBB	-1
L1-12-*	4KXZI	2.83	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BPABPDGDDDBB	-1
L1-12-*	4KXZL	2.83	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BPABPDGDDDBB	-1
L1-12-*	4KXZM	2.83	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BPABPDGDDDBB	-1
L1-12-*	4KXZP	2.83	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	83.3	RASQSLGSSYLA	BPABPDGDDDBB	-1
L1-12-*	5DR5L	1.85	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	RASQSISSNELA	PPABPPAPAPBB	-1
L1-12-*	5IHZB	1.64	lambda	Homo.sapiens	Hu_IGLV4-69*01	97.1	Hu_IGLV4-69*01	91.7	TLSSGHSSYVIA	BPPPLDPLBPBB	-1
L1-12-*	5TFSL	2.319	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	100	RASQSVSSSYLA	BPPAABPDADPB	-1
L1-12-*	5TRUL	3	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	91.7	RASQSVGSSYLA	BBABPBGBLPBB	-1
L1-12-*	5UG0C	3.4	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	83.3	RASQSVSSYYLG	BPAPPDLGAAPB	-1
L1-12-*	5UJZG	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBAPPDLLDDBB	-1
L1-12-*	5UJZH	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBAPPDLLDDBB	-1
L1-12-*	5UJZI	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBAPPDLLDDBB	-1
L1-12-*	5UK0G	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBAPPDLLDDBB	-1
L1-12-*	5UK0H	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBAPPDLLDDBB	-1
L1-12-*	5UK0I	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBAPPDLLDDBB	-1
L1-12-*	5UK1G	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBAPPDLLADBB	-1
L1-12-*	5UK1H	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBAPPDLLADBB	-1
L1-12-*	5UK1I	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBAPPDLLADBB	-1
L1-12-*	5UK2G	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBABPDLLDDBB	-1
L1-12-*	5UK2H	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBABPDLLDDBB	-1
L1-12-*	5UK2I	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV3-20*01	66.7	RASQSISGYYLT	BBABPDLLDDBB	-1
L1-12-*	5VN8J	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	41.7	RSSHSIRSRRVA	PPAPBPAALBBB	-1
L1-12-*	5VN8K	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	41.7	RSSHSIRSRRVA	PPAPBPAALBBB	-1
L1-12-*	5VN8L	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	41.7	RSSHSIRSRRVA	PPAPBPAALBBB	-1
L1-12-*	5W1KM	3.99	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	RASQSVSSSYLA	PBAPPPAGAAPB	-1
L1-12-*	5W1KN	3.99	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	RASQSVSSSYLA	PBAPPPAGLAPB	-1
L1-12-*	5W4LC	2.92	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	75	RASRTVSSSNLA	BPABPPPPPBBB	-1
L1-12-*	5W4LE	2.92	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	75	RASRTVSSSNLA	BPADGPPPPBBB	-1
L1-12-*	5WKOB	3.492	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	RASQSVSSSYLA	BBABPAGPBBBB	-1
L1-12-*	5WKOD	3.492	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	RASQSVSSSYLA	BBABPDGPPBBB	-1
L1-12-*	5Y2LJ	2.902	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100	RASQSVSSSYLA	BBABPPLLLPBB	-1
L1-12-*	5Y2MJ	3.8	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100	RASQSVSSSYLA	BBABPPDDLPBB	-1
L1-12-*	5Y2ML	3.8	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100	RASQSVSSSYLA	BBABPPDDLPBB	-1
L1-12-*	5YUPL	1.81	kappa	Mus.musculus	Mo_IGKV6-23*01	94.2	CDRLenMismatch	-1	KASQDVGIGLVS	BBABPDGAGLBB	-1
L1-12-*	5YWFA	2.206	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	CDRLenMismatch	-1	RASQSVSTSYMH	BPABGBAGPLBB	-1
L1-12-*	5YWFC	2.206	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	CDRLenMismatch	-1	RASQSVSTSYMH	BPABPLAGPLBB	-1
L1-12-*	5YWOM	EM	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	CDRLenMismatch	-1	RASQSVSTSYMH	BBAPPLAGDLBB	-1
L1-12-*	5YWOQ	EM	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	CDRLenMismatch	-1	RASQSVSTSYMH	BBAPPLAGDLBB	-1
L1-12-*	5YWPM	EM	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	CDRLenMismatch	-1	RASQSVSTSYMH	BPABGBAGPLBB	-1
L1-12-*	5YWPQ	EM	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	CDRLenMismatch	-1	RASQSVSTSYMH	BPABGBAGPLBB	-1
L1-12-*	6BKBL	2.799	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	91.7	RASQSVSGSYLA	BPABPAGPPBBB	-1
L1-12-*	6NQDD	EM	kappa	Homo.sapiens	Hu_IGKV1D-8*01	79.4	Mo_IGKV4-92*01	50	RASQSITGNWVA	BBAPBPDALPBB	-1
L1-12-*	6NQDH	EM	kappa	Homo.sapiens	Hu_IGKV1D-8*01	79.4	Mo_IGKV4-92*01	50	RASQSITGNWVA	BBAPBPDALPBB	-1
L1-12-*	6NQDL	EM	kappa	Homo.sapiens	Hu_IGKV1D-8*01	79.4	Mo_IGKV4-92*01	50	RASQSITGNWVA	BBAPBPDALPBB	-1

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019