PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5I8K

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Rb_IGHV1S69*01	85.7	Rb_IGHV1S69*01	61.5	H1	13	H1-13-1	13	TASGFTISNYHMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Rb_IGHV1S69*01	85.7	Rb_IGHV1S69*01	33.3	H2	9	H2-9-1	10	FIDTGGSAA	BBBAALBBB
H	heavy	Homo.sapiens	Rb_IGHV1S69*01	85.7	Rb_IGHV1S69*01	100.0	H3	12	H3-12-*	-1	ARGAPAWGTANV	BBEBAABAAAAB
H	heavy	Homo.sapiens	Rb_IGHV1S69*01	85.7	Rb_IGHV1S69*01	83.3	H4	6	H4-6-1	7	RTSTTV	BBAABB
L	kappa	Homo.sapiens	Rb_IGKV1S15*01	92.3	Rb_IGKV1S15*01	53.8	L1	13	L1-13-3	4	QSSRSVwnNNFLS	BBABBBBLLABBB
L	kappa	Homo.sapiens	Rb_IGKV1S15*01	92.3	Rb_IGKV1S15*01	75.0	L2	8	L2-8-1	6	SDASKLAS	BLLABBBB
L	kappa	Homo.sapiens	Rb_IGKV1S15*01	92.3	Rb_IGKV1S15*01	10.0	L3	10	L3-10-2	23	AGdLSDWIHT	BBBAELLBBB
L	kappa	Homo.sapiens	Rb_IGKV1S15*01	92.3	Rb_IGKV1S15*01	100.0	L4	6	L4-6-1	5	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022