PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5GKR

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-59*01	95.9	Hu_IGHV4-59*01	92.3	H1	13	H1-13-7	16	TVSGGSISSYFWS	BPBLBPDABGBBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*01	95.9	Hu_IGHV4-59*01	100	H2	9	H2-9-1	10	YIYYSGSTN	BBPAALPBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*01	95.9	Hu_IGHV	-1	H3	10	H3-10-*	-1	ARHRNWLFDY	BPBBLLBBDB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	98.5	Hu_IGLV2-11*01	100	L1	14	L1-14-2	12	TGTSSDVGGYNYVS	PBBAADAADBDBBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	98.5	Hu_IGLV2-11*01	100	L2	8	L2-8-1	10	YDVSKRPS	BLGDPBPP
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	98.5	Hu_IGLV	-1	L3	10	L3-10-*	-1	CSYAGSYTYV	BBPDGLLBBB
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	95.9	Hu_IGHV4-59*01	100	H2	9	H2-9-1	10	YIYYSGSTN	BBPAALPBB
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	95.9	Hu_IGHV	-1	H3	10	H3-10-*	-1	ARHRNWLFDY	BPBBLLBBDB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	98.5	Hu_IGLV2-11*01	100	L1	14	L1-14-2	11	TGTSSDVGGYNYVS	PBBAADAAABDBBB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	98.5	Hu_IGLV2-11*01	100	L2	8	L2-8-1	10	YDVSKRPS	BLGDPBPP
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	98.5	Hu_IGLV	-1	L3	10	L3-10-*	-1	CSYAGSYTYV	BBPDGLLBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019