PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3J8W

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV1-87*01	92.3	H1	13	H1-13-1	11	KASGYTFISYWMQ	PPBLBPAAABPBP
F	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV1-87*01	90	H2	10	H2-10-1	11	AIYPGDGATR	BBBAADLPBB
F	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARPSYYDYDVTWFAY	BBPPBDBADBBBBDB
G	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV1-87*01	92.3	H1	13	H1-13-1	11	KASGYTFISYWMQ	PPBLBPAAABPBP
G	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV1-87*01	90	H2	10	H2-10-1	11	AIYPGDGATR	BBBAADLPBB
G	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARPSYYDYDVTWFAY	BBPPBDBADBBBBDB
H	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV1-87*01	92.3	H1	13	H1-13-1	11	KASGYTFISYWMQ	PPBLBPAAABPBP
H	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV1-87*01	90	H2	10	H2-10-1	11	AIYPGDGATR	BBBAADLPBB
H	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARPSYYDYDVTWFAY	BBPPBDBADBBBBDB
I	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV1-87*01	92.3	H1	13	H1-13-1	11	KASGYTFISYWMQ	PPBLBPAAABPBP
I	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV1-87*01	90	H2	10	H2-10-1	11	AIYPGDGATR	BBBAADLPBB
I	heavy	Mus.musculus	Mo_IGHV1-87*01	97.1	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARPSYYDYDVTWFAY	BBPPBDBADBBBBDB
J	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV12-44*01	100	L1	11	L1-11-1	8	RASENIYSYLA	BPABPDGDPBB
J	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV12-44*01	87.5	L2	8	L2-8-1	7	YNAETLAE	BLLDPPPP
J	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QHHYVSPLT	BPDABPpPB
K	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV12-44*01	100	L1	11	L1-11-1	8	RASENIYSYLA	BPABPDGDPBB
K	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV12-44*01	87.5	L2	8	L2-8-1	7	YNAETLAE	BLLDPPPP
K	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QHHYVSPLT	BPDABPpPB
L	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV12-44*01	100	L1	11	L1-11-1	8	RASENIYSYLA	BPABPDGDPBB
L	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV12-44*01	87.5	L2	8	L2-8-1	7	YNAETLAE	BLLDPPPP
L	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QHHYVSPLT	BPDABPpPB
M	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV12-44*01	100	L1	11	L1-11-1	8	RASENIYSYLA	BPABPDGDPBB
M	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV12-44*01	87.5	L2	8	L2-8-1	7	YNAETLAE	BLLDPPPP
M	kappa	Mus.musculus	Mo_IGKV12-44*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QHHYVSPLT	BPDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019