PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6OSY

#CDRs = 6; #Clusters = 17.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
5	heavy	Homo.sapiens	Hu_IGHV4-59*01	79.5	Hu_IGHV4-59*01	46.2	H1	13	H1-13-1	33	NVSGTLVRDNYWS	PBBGPBAAABPBB
5	heavy	Homo.sapiens	Hu_IGHV4-59*01	79.5	Hu_IGHV4-59*01	55.6	H2	9	H2-9-3	39	YVHDSGDTN	BBBPLLPBP
5	heavy	Homo.sapiens	Hu_IGHV4-59*01	79.5	Hu_IGHV	-1	H3	26	H3-26-*	-1	ATTKHGRRIYGVVAFKEWFTYFYMDV	BBBBBBBPBDBPAADLPBBBBPBPAB
6	lambda	Homo.sapiens	Hu_IGLV3-21*01	79	Hu_IGLV3-21*01	45.5	L1	11	L1-11-*	-1	GEESLGSRSVI	GPPPDBPBBPB
6	lambda	Homo.sapiens	Hu_IGLV3-21*01	79	Hu_IGLV3-21*01	62.5	L2	8	L2-8-5	20	YNNNDRPS	DBADBBPP
6	lambda	Homo.sapiens	Hu_IGLV3-21*01	79	Hu_IGLV	-1	L3	12	L3-12-*	-1	HIWDSRRPTNWV	BBBPAAPPPPAB
7	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	30	L1	10	L1-10-*	-1	KASQGGNAMT	BPABPLPPPB
7	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	75	L2	8	L2-8-1	21	YDTSRRAS	BLLDBPPP
7	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV	-1	L3	5	L3-5-*	-1	QQFEF	BBADB
8	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	61.5	H1	13	H1-13-1	15	RASGYNFRDYSIH	BBBLBPAAABPPB
8	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	40	H2	10	H2-10-1	19	WIKPLWGAVS	BBPAADLPBB
8	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV	-1	H3	16	H3-16-*	-1	VRRGSCDYCGDFPWQY	BBPPAPAAPPAAPPDP
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	79.5	Hu_IGHV4-59*01	46.2	H1	13	H1-13-1	33	NVSGTLVRDNYWS	PBBGPBDAABPBB
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	79.5	Hu_IGHV4-59*01	55.6	H2	9	H2-9-3	39	YVHDSGDTN	BBBPLLPBP
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	79.5	Hu_IGHV	-1	H3	26	H3-26-*	-1	ATTKHGRRIYGVVAFKEWFTYFYMDV	BBBBBBBPBDBPAADLBBBBBPBPAB
D	lambda	Homo.sapiens	Hu_IGLV3-21*01	79	Hu_IGLV3-21*01	45.5	L1	11	L1-11-*	-1	GEESLGSRSVI	GPPPDBPBBPB
D	lambda	Homo.sapiens	Hu_IGLV3-21*01	79	Hu_IGLV3-21*01	62.5	L2	8	L2-8-5	20	YNNNDRPS	DBADBBPP
D	lambda	Homo.sapiens	Hu_IGLV3-21*01	79	Hu_IGLV	-1	L3	12	L3-12-*	-1	HIWDSRRPTNWV	BBBPAAPPPPAB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	30	L1	10	L1-10-*	-1	KASQGGNAMT	BPABPLPPBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	75	L2	8	L2-8-1	22	YDTSRRAS	BLLDBPPP
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV	-1	L3	5	L3-5-*	-1	QQFEF	BBADB
F	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	61.5	H1	13	H1-13-1	16	RASGYNFRDYSIH	BBBLBPAAAPPPB
F	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	40	H2	10	H2-10-1	18	WIKPLWGAVS	BBPAADLPBB
F	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV	-1	H3	16	H3-16-*	-1	VRRGSCDYCGDFPWQY	BBPPAPAAPPDAPPDP
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	80.8	CDRLenMismatch	-1	H1	15	H1-15-1	33	AVSGDTISSPYYFWS	BBBLBBAAPPLBPPB
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	80.8	CDRLenMismatch	-1	H2	10	H2-10-*	-1	GLYSNTMDVY	BBBADBDPBB
H	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	80.8	-	-1	H3	15	H3-15-*	-1	ARERVVAHNYYGLDL	BBBPPAADBADPBPP
I	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	80.8	CDRLenMismatch	-1	H1	15	H1-15-1	33	AVSGDTISSPYYFWS	BBBLBBAAPPLBPPB
I	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	80.8	CDRLenMismatch	-1	H2	10	H2-10-*	-1	GLYSNTMDVY	BBBADBDPBB
I	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	80.8	-	-1	H3	15	H3-15-*	-1	ARERVVAHNYYGLDL	BBBPPAADBADPBPP
J	kappa	Homo.sapiens	Hu_IGKV1D-33*01	85.5	Hu_IGKV1D-33*01	63.6	L1	11	L1-11-1	28	RASQDIKNSLS	BBABPDLDBBB
J	kappa	Homo.sapiens	Hu_IGKV1D-33*01	85.5	Hu_IGKV1D-33*01	50	L2	8	L2-8-1	23	HHSSTLET	BLLDBPBP
J	kappa	Homo.sapiens	Hu_IGKV1D-33*01	85.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQYEDFPLT	BPDABPpPB
L	kappa	Homo.sapiens	Hu_IGKV1D-33*01	85.5	Hu_IGKV1D-33*01	63.6	L1	11	L1-11-1	28	RASQDIKNSLS	BBABPDLDBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-33*01	85.5	Hu_IGKV1D-33*01	50	L2	8	L2-8-1	22	HHSSTLET	BLLDBPBP
L	kappa	Homo.sapiens	Hu_IGKV1D-33*01	85.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQYEDFPLT	BPDABPpPB
M	heavy	Homo.sapiens	Hu_IGHV4-59*01	79.5	Hu_IGHV4-59*01	46.2	H1	13	H1-13-1	33	NVSGTLVRDNYWS	PBBGPBAAABPBB
M	heavy	Homo.sapiens	Hu_IGHV4-59*01	79.5	Hu_IGHV4-59*01	55.6	H2	9	H2-9-*	-1	YVHDSGDTN	BBBPLLPDP
M	heavy	Homo.sapiens	Hu_IGHV4-59*01	79.5	Hu_IGHV	-1	H3	26	H3-26-*	-1	ATTKHGRRIYGVVAFKEWFTYFYMDV	BPBBBBBPBDBPAADLPBBBBPBPAB
N	lambda	Homo.sapiens	Hu_IGLV3-21*01	79	Hu_IGLV3-21*01	45.5	L1	11	L1-11-*	-1	GEESLGSRSVI	GPPPDBPBBPB
N	lambda	Homo.sapiens	Hu_IGLV3-21*01	79	Hu_IGLV3-21*01	62.5	L2	8	L2-8-5	19	YNNNDRPS	DBADBBPP
N	lambda	Homo.sapiens	Hu_IGLV3-21*01	79	Hu_IGLV	-1	L3	12	L3-12-*	-1	HIWDSRRPTNWV	BBBPADPPPPAB
O	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	30	L1	10	L1-10-*	-1	KASQGGNAMT	BPABPLPPBB
O	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV4-55*01	75	L2	8	L2-8-1	22	YDTSRRAS	BLLDBPPP
O	kappa	Homo.sapiens	Hu_IGKV3-20*01	77	Mo_IGKV	-1	L3	5	L3-5-*	-1	QQFEF	BBADB
P	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	61.5	H1	13	H1-13-1	16	RASGYNFRDYSIH	BBBLBPAAABPPB
P	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV1-22*01	40	H2	10	H2-10-1	19	WIKPLWGAVS	BBPAADLPBB
P	heavy	Homo.sapiens	Hu_IGHV1-24*01	58.8	Mo_IGHV	-1	H3	16	H3-16-*	-1	VRRGSCDYCGDFPWQY	BBPPAPAAPPDAPPAP
R	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	80.8	CDRLenMismatch	-1	H1	15	H1-15-1	34	AVSGDTISSPYYFWS	BBBLBBAAPPLBPPB
R	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	80.8	CDRLenMismatch	-1	H2	10	H2-10-*	-1	GLYSNTMDVY	BBBABBDPBB
R	heavy	Homo.sapiens	Hu_IGHV4-38-2*01	80.8	-	-1	H3	15	H3-15-*	-1	ARERVVAHNYYGLDL	BBBPPAADBADPBPP
S	kappa	Homo.sapiens	Hu_IGKV1D-33*01	85.5	Hu_IGKV1D-33*01	63.6	L1	11	L1-11-1	28	RASQDIKNSLS	BBABPDLDBBB
S	kappa	Homo.sapiens	Hu_IGKV1D-33*01	85.5	Hu_IGKV1D-33*01	50	L2	8	L2-8-1	23	HHSSTLET	BLLDBBPP
S	kappa	Homo.sapiens	Hu_IGKV1D-33*01	85.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	10	QQYEDFPLT	BPDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019