PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6NJM

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
K	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	90.9	L1	11	L1-11-2	16	RASQDISNYLS	BBABPDLLPBB
K	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	100	L2	8	L2-8-1	18	YYTSRLHS	BLLDBBPP
K	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	23	QQGNTLPLT	BPDABPpPP
L	heavy	Mus.musculus	Mo_IGHV2-9*01	95.9	Mo_IGHV2-9*01	84.6	H1	13	H1-13-1	24	TVSGFSLTNYGVH	BBBLBBDADBBBB
L	heavy	Mus.musculus	Mo_IGHV2-9*01	95.9	Mo_IGHV2-9*01	88.9	H2	9	H2-9-1	14	VIWAGGSTN	BBBAALPBB
L	heavy	Mus.musculus	Mo_IGHV2-9*01	95.9	Mo_IGHV	-1	H3	13	H3-13-*	-1	AREDYDYDWHFDV	BBBBBBLBPBBAB
O	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	90.9	L1	11	L1-11-2	15	RASQDISNYLS	BBABPDLLPBB
O	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV10-96*01	100	L2	8	L2-8-1	18	YYTSRLHS	BLLDBBPP
O	kappa	Mus.musculus	Mo_IGKV10-96*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	23	QQGNTLPLT	BPDABPpPP
P	heavy	Mus.musculus	Mo_IGHV2-9*01	95.9	Mo_IGHV2-9*01	84.6	H1	13	H1-13-1	25	TVSGFSLTNYGVH	BBBLBBDADBBBB
P	heavy	Mus.musculus	Mo_IGHV2-9*01	95.9	Mo_IGHV2-9*01	88.9	H2	9	H2-9-1	13	VIWAGGSTN	BBPAALPBB
P	heavy	Mus.musculus	Mo_IGHV2-9*01	95.9	Mo_IGHV	-1	H3	13	H3-13-*	-1	AREDYDYDWHFDV	BBBBBBLBPBBAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019