PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6NC2

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	17	AASGFAFKDFGMH	PBBLBPAAAPPBB
H	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	H2	11	H2-11-*	-1	VIGGGHGQHQS	BBPPGALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV	-1	H3	24	H3-24-*	-1	AKDRLGRPWNIGGRLVYYYYGMDV	BBPADLBPPPBLLBPBBPBDGPDB
L	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	16	QASQDIKKSLN	BBABPDGDPBB
L	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	62.5	L2	8	L2-8-1	14	HDASILQT	BLLDBPPP
L	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QEYENLQFT	BPDABPDLP
O	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	17	AASGFAFKDFGMH	PBBLBPAAAPPBB
O	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	H2	11	H2-11-*	-1	VIGGGHGQHQS	BBPPGALABBB
O	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV	-1	H3	24	H3-24-*	-1	AKDRLGRPWNIGGRLVYYYYGMDV	BBPADLBPPPBLLBPBBPBDGPDB
P	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	17	AASGFAFKDFGMH	PBBLBPAAAPPBB
P	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	H2	11	H2-11-*	-1	VIGGGHGQHQS	BBPPGALABBB
P	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV	-1	H3	24	H3-24-*	-1	AKDRLGRPWNIGGRLVYYYYGMDV	BBPADLBPPPBLLBPBBPBDGPDB
Q	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	17	AASGFAFKDFGMH	PBBLBPAAAPPBB
Q	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	H2	11	H2-11-*	-1	VIGGGHGQHQS	BBPPGALABBB
Q	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV	-1	H3	24	H3-24-*	-1	AKDRLGRPWNIGGRLVYYYYGMDV	BBPADLBPPPBLLBPBBPBDGPDB
R	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	17	AASGFAFKDFGMH	PBBLBPAAAPPBB
R	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	H2	11	H2-11-*	-1	VIGGGHGQHQS	BBPPGALABBB
R	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV	-1	H3	24	H3-24-*	-1	AKDRLGRPWNIGGRLVYYYYGMDV	BBPADLBPPPBLLBPBBPBDGPDB
S	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	17	AASGFAFKDFGMH	PBBLBPAAAPPBB
S	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	H2	11	H2-11-*	-1	VIGGGHGQHQS	BBPPGALABBB
S	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	Hu_IGHV	-1	H3	24	H3-24-*	-1	AKDRLGRPWNIGGRLVYYYYGMDV	BBPADLBPPPBLLBPBBPBDGPDB
T	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	16	QASQDIKKSLN	BBABPDGDPBB
T	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	62.5	L2	8	L2-8-1	14	HDASILQT	BLLDBPPP
T	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QEYENLQFT	BPDABPDLP
U	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	16	QASQDIKKSLN	BBABPDGDPBB
U	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	62.5	L2	8	L2-8-1	14	HDASILQT	BLLDBPPP
U	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QEYENLQFT	BPDABPDLP
V	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	16	QASQDIKKSLN	BBABPDGDPBB
V	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	62.5	L2	8	L2-8-1	14	HDASILQT	BLLDBPPP
V	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QEYENLQFT	BPDABPDLP
W	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	16	QASQDIKKSLN	BBABPDGDPBB
W	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	62.5	L2	8	L2-8-1	14	HDASILQT	BLLDBPPP
W	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QEYENLQFT	BPDABPDLP
X	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	16	QASQDIKKSLN	BBABPDGDPBB
X	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV1D-33*01	62.5	L2	8	L2-8-1	14	HDASILQT	BLLDBPPP
X	kappa	Homo.sapiens	Hu_IGKV1D-33*01	79.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QEYENLQFT	BPDABPDLP

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019