PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6M87

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	90	L1	10	L1-10-1	17	SASSSVSYVH	BBABPBDBBB
A	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	100	L2	8	L2-8-1	12	YDTSKLAS	BLGDPPPP
A	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	HQWRTNPPT	BBBABPpPB
B	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	100	H1	13	H1-13-1	11	KASGYSFTDYNMN	PPBLBPAAABPBB
B	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	80	H2	10	H2-10-1	8	VINPNSGTTN	BBPAAALPBB
B	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGGGFRRGFDS	BPPAGPLDGPAB
C	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	90	L1	10	L1-10-1	16	SASSSVSYVH	BBABPBDBBB
C	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	100	L2	8	L2-8-1	13	YDTSKLAS	BLGDPPPP
C	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	HQWRTNPPT	BBBABPpPB
D	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	100	H1	13	H1-13-1	11	KASGYSFTDYNMN	PPBLBPAAABPBB
D	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	80	H2	10	H2-10-1	8	VINPNSGTTN	BBPAAALPBB
D	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGGGFRRGFDS	BPPAGPLDGPAB
E	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	90	L1	10	L1-10-1	17	SASSSVSYVH	BBABPBDBBB
E	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	100	L2	8	L2-8-1	12	YDTSKLAS	BLGDPPPP
E	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	HQWRTNPPT	BBBABPpPB
F	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	100	H1	13	H1-13-1	11	KASGYSFTDYNMN	PPBLBPAAABPBB
F	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	80	H2	10	H2-10-1	8	VINPNSGTTN	BBPAAALPBB
F	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGGGFRRGFDS	BPPAGPLDGPAB
G	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	90	L1	10	L1-10-1	17	SASSSVSYVH	BBABPBDBBB
G	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	100	L2	8	L2-8-1	12	YDTSKLAS	BLGDPPPP
G	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	HQWRTNPPT	BBDABPpPB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	100	H1	13	H1-13-1	11	KASGYSFTDYNMN	PPBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	80	H2	10	H2-10-1	8	VINPNSGTTN	BBPAAALPBB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGGGFRRGFDS	BPPAGPLDGPAB
I	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	90	L1	10	L1-10-1	17	SASSSVSYVH	BBABPBDBBB
I	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	100	L2	8	L2-8-1	12	YDTSKLAS	BLGDPPPP
I	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	HQWRTNPPT	BBDABPpPB
J	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	100	H1	13	H1-13-1	11	KASGYSFTDYNMN	PPBLBPAAABPBB
J	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	80	H2	10	H2-10-1	8	VINPNSGTTN	BBPAAALPBB
J	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGGGFRRGFDS	BPPAGPLDGPAB
K	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	90	L1	10	L1-10-1	16	SASSSVSYVH	BBABPBDBBB
K	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV4-59*01	100	L2	8	L2-8-1	12	YDTSKLAS	BLGDPPPP
K	kappa	Mus.musculus	Mo_IGKV4-59*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	HQWRTNPPT	BBBABPpPB
L	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	100	H1	13	H1-13-1	11	KASGYSFTDYNMN	PPBLBPAAABPBB
L	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV1-39*01	80	H2	10	H2-10-1	8	VINPNSGTTN	BBPAAALPBB
L	heavy	Mus.musculus	Mo_IGHV1-39*01	95.8	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGGGFRRGFDS	BPPAGPLDGPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019