PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6IW2

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	61.5	H1	13	H1-13-7	19	TVSGGSTYNHHWS	BBBLBPDAPGBPB
B	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	66.7	H2	9	H2-9-1	16	YISYSGKSN	BBBAALPBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV	-1	H3	17	H3-17-*	-1	AREYRDDTNYYYYSLDV	BPPPBBAADLBBDGPDB
C	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	90.9	L1	11	L1-11-1	9	RASQSIGSWLA	BBABPDGDPBB
C	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	9	YKASSLES	BLLDPPPP
C	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQYNNYSYT	BPDABPpPB
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	61.5	H1	13	H1-13-7	19	TVSGGSTYNHHWS	BBBLBPDAPGBPB
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	66.7	H2	9	H2-9-1	16	YISYSGKSN	BBBAALPBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV	-1	H3	17	H3-17-*	-1	AREYRDDTNYYYYSLDV	BPPPBBAADLBBDGPDB
F	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	90.9	L1	11	L1-11-1	8	RASQSIGSWLA	BBABPDGDPBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	9	YKASSLES	BLLDPPPP
F	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQYNNYSYT	BPDABPpPB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	61.5	H1	13	H1-13-7	19	TVSGGSTYNHHWS	BBBLBPDAPGBPB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	66.7	H2	9	H2-9-1	16	YISYSGKSN	BBBAALPBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV	-1	H3	17	H3-17-*	-1	AREYRDDTNYYYYSLDV	BPPPBBAADLBBDGPDB
I	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	90.9	L1	11	L1-11-1	8	RASQSIGSWLA	BBABPDGDPBB
I	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	9	YKASSLES	BLLDPPPP
I	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQYNNYSYT	BPDABPpPB
K	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	61.5	H1	13	H1-13-7	19	TVSGGSTYNHHWS	BBBLBPDAPGBPB
K	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	66.7	H2	9	H2-9-1	17	YISYSGKSN	BBBAALPBB
K	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV	-1	H3	17	H3-17-*	-1	AREYRDDTNYYYYSLDV	BPPPBBAADLBBDGPAB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	90.9	L1	11	L1-11-1	9	RASQSIGSWLA	BBABPDGDPBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	9	YKASSLES	BLLDPPPP
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQYNNYSYT	BPDABPpPB
N	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	61.5	H1	13	H1-13-7	19	TVSGGSTYNHHWS	BBBLBPDAPGBPB
N	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	66.7	H2	9	H2-9-1	16	YISYSGKSN	BBBAALPBB
N	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV	-1	H3	17	H3-17-*	-1	AREYRDDTNYYYYSLDV	BPPPBBAADLBBDGPDB
O	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	90.9	L1	11	L1-11-1	8	RASQSIGSWLA	BBABPDGDPBB
O	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	9	YKASSLES	BLLDPPPP
O	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQYNNYSYT	BPDABPpPB
Q	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	61.5	H1	13	H1-13-7	19	TVSGGSTYNHHWS	BBBLBPDAPGBPB
Q	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV4-59*01	66.7	H2	9	H2-9-1	17	YISYSGKSN	BBBAALPBB
Q	heavy	Homo.sapiens	Hu_IGHV4-59*01	84.9	Hu_IGHV	-1	H3	17	H3-17-*	-1	AREYRDDTNYYYYSLDV	BPPPBBAADLBBDGPAB
R	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	90.9	L1	11	L1-11-1	8	RASQSIGSWLA	BBABPDGDPBB
R	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV1-5*01	87.5	L2	8	L2-8-1	9	YKASSLES	BLLDPPPP
R	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQYNNYSYT	BPDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019