PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6GKD

#CDRs = 3; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	AATGSIRSINNMG	BPBGPBABBDBBB
B	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H2	9	H2-9-1	11	IITRVGNTD	BBPAALPBB
B	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV	-1	H3	17	H3-17-*	-1	HAEITEQSRPFYLTDDY	BBPBBPAAPABPBBBPB
C	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	TASGRAFSWYVMG	PBBBPLAAAPPPB
C	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H2	10	H2-10-2	14	TVSGNGSRRD	BBPAALABBB
C	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV	-1	H3	16	H3-16-*	-1	AASSTYYYTDPEKYDY	BBBABPLBDPAAAPAB
G	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	AATGSIRSINNMG	BPBGPBABBDBBB
G	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H2	9	H2-9-1	11	IITRVGNTD	BBPAALPBB
G	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV	-1	H3	17	H3-17-*	-1	HAEITEQSRPFYLTDDY	BBPBBPAAPABPBBBPB
H	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	TASGRAFSWYVMG	PBBBPLAAAPPPB
H	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H2	10	H2-10-2	8	TVSGNGSRRD	BBPAALABBB
H	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV	-1	H3	16	H3-16-*	-1	AASSTYYYTDPEKYDY	BBBABPLBDPAAABAB
J	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	AATGSIRSINNMG	BPBGPBABBABBB
J	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H2	9	H2-9-1	12	IITRVGNTD	BBPAALPBB
J	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV	-1	H3	17	H3-17-*	-1	HAEITEQSRPFYLTDDY	BBPBBPAAPABPBBBPB
K	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	TASGRAFSWYVMG	PBBBPLAAAPPPB
K	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H2	10	H2-10-2	13	TVSGNGSRRD	BBPAALABBB
K	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV	-1	H3	16	H3-16-*	-1	AASSTYYYTDPEKYDY	BBBABPLBDPAAAPAB
M	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	AATGSIRSINNMG	BPBGPBABBBLPB
M	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H2	9	H2-9-1	12	IITRVGNTD	BBPAALPBB
M	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV	-1	H3	17	H3-17-*	-1	HAEITEQSRPFYLTDDY	BBPBBPAAPABPBBBPB
N	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	TASGRAFSWYVMG	PBBBPLAAAPPPB
N	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H2	10	H2-10-2	12	TVSGNGSRRD	BBPAALABBB
N	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV	-1	H3	16	H3-16-*	-1	AASSTYYYTDPEKYDY	BBBABPLBAPAAABAB
P	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	AATGSIRSINNMG	BPBGPBABBABBB
P	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H2	9	H2-9-1	11	IITRVGNTD	BBPAALPBB
P	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV	-1	H3	17	H3-17-*	-1	HAEITEQSRPFYLTDDY	BBPBBPAAPABPBBBPB
Q	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	TASGRAFSWYVMG	PBBBPLAAAPPPB
Q	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H2	10	H2-10-2	13	TVSGNGSRRD	BBPAALABBB
Q	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV	-1	H3	16	H3-16-*	-1	AASSTYYYTDPEKYDY	BBBABPLBDPAAAPAB
S	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	AATGSIRSINNMG	BPBGPBABBABBB
S	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV1S3*01	0	H2	9	H2-9-1	12	IITRVGNTD	BBPAALPBB
S	heavy	Lama.glama	La_IGHV1S3*01	90.4	La_IGHV	-1	H3	17	H3-17-*	-1	HAEITEQSRPFYLTDDY	BBPBBPAAPABPBBBPB
T	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H1	13	H1-13-*	-1	TASGRAFSWYVMG	PBBBPLAAAPBPB
T	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV1S3*01	0	H2	10	H2-10-2	13	TVSGNGSRRD	BBPAALABBB
T	heavy	Lama.glama	La_IGHV1S3*01	95.9	La_IGHV	-1	H3	16	H3-16-*	-1	AASSTYYYTDPEKYDY	BBBABPLBDPAAAPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019