PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6EDU

#CDRs = 6; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
J	heavy	Homo.sapiens	Hu_IGHV1-24*01	94.5	Hu_IGHV1-24*01	76.9	H1	13	H1-13-*	-1	KVSGFTLTGLSIH	PBBLBBPALDABP
J	heavy	Homo.sapiens	Hu_IGHV1-24*01	94.5	Hu_IGHV1-24*01	60	H2	10	H2-10-*	-1	GFGPEENEII	BBBAPADPPP
J	heavy	Homo.sapiens	Hu_IGHV1-24*01	94.5	Hu_IGHV	-1	H3	18	H3-18-*	-1	ATGGNYYNLWTGYYPLAY	BBPPPBLPDDLDDPPBAB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	92.3	L1	13	L1-13-1	22	SGSSSNIGKNYVS	BBBAADDADBPBB
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	50	L2	8	L2-8-2	24	FDDTQRPS	BLLDPBPA
K	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV	-1	L3	12	L3-12-*	-1	GTWDSSLSTGQL	BBBBAPAPABPB
L	heavy	Homo.sapiens	Hu_IGHV1-24*01	94.5	Hu_IGHV1-24*01	76.9	H1	13	H1-13-*	-1	KVSGFTLTGLSIH	PBBLBBPDLDABP
L	heavy	Homo.sapiens	Hu_IGHV1-24*01	94.5	Hu_IGHV1-24*01	60	H2	10	H2-10-*	-1	GFGPEENEII	BBBAPADPPP
L	heavy	Homo.sapiens	Hu_IGHV1-24*01	94.5	Hu_IGHV	-1	H3	18	H3-18-*	-1	ATGGNYYNLWTGYYPLAY	BBPPPBLPDDLDDPPBAB
M	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	92.3	L1	13	L1-13-1	22	SGSSSNIGKNYVS	BBBAADDADBPBB
M	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	50	L2	8	L2-8-2	24	FDDTQRPS	BLLDPBPA
M	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV	-1	L3	12	L3-12-*	-1	GTWDSSLSTGQL	BBBBAPAPABPB
N	heavy	Homo.sapiens	Hu_IGHV1-24*01	94.5	Hu_IGHV1-24*01	76.9	H1	13	H1-13-*	-1	KVSGFTLTGLSIH	PBBLBBPALDABP
N	heavy	Homo.sapiens	Hu_IGHV1-24*01	94.5	Hu_IGHV1-24*01	60	H2	10	H2-10-*	-1	GFGPEENEII	BBBAPADPPP
N	heavy	Homo.sapiens	Hu_IGHV1-24*01	94.5	Hu_IGHV	-1	H3	18	H3-18-*	-1	ATGGNYYNLWTGYYPLAY	BBPPPBLPADLDDPPPDB
O	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	92.3	L1	13	L1-13-1	22	SGSSSNIGKNYVS	BBBAADDADBPBB
O	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	50	L2	8	L2-8-2	23	FDDTQRPS	BLLDPBPA
O	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV	-1	L3	12	L3-12-*	-1	GTWDSSLSTGQL	BBBBAPAPABPB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H1	14	H1-14-*	-1	KAYGVNTFGLYAVN	PBPLBABAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H2	8	H2-8-*	-1	QIWRWKSS	BDPLLBPB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	-	-1	H3	22	H3-22-*	-1	TTTSTYDKWSGLHHDGVMAFSS	BBBPAAPAAALABBLLBBPBAB
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	50	L1	12	L1-12-2	26	RASQSITGNWVA	PBAPBPPLLPBB
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	37.5	L2	8	L2-8-2	24	YRGAALLG	BLLDBPPA
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	21	QQYDTYPGT	PPBABPpPB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H1	14	H1-14-*	-1	KAYGVNTFGLYAVN	PBPLBABAAABBBB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H2	8	H2-8-*	-1	QIWRWKSS	BDPLLBPB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	-	-1	H3	22	H3-22-*	-1	TTTSTYDKWSGLHHDGVMAFSS	BBBPAAPAAALABBLLBBPBAB
S	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	50	L1	12	L1-12-2	26	RASQSITGNWVA	PBAPBPPLLPBB
S	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	37.5	L2	8	L2-8-2	24	YRGAALLG	BLGDBPPA
S	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	21	QQYDTYPGT	PPBABPpPB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H1	14	H1-14-*	-1	KAYGVNTFGLYAVN	PBPLBABAAABBBB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H2	8	H2-8-*	-1	QIWRWKSS	BDPLLBPB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	-	-1	H3	22	H3-22-*	-1	TTTSTYDKWSGLHHDGVMAFSS	BBBPAAPAAALABBLLBBPBAB
U	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	50	L1	12	L1-12-2	26	RASQSITGNWVA	PBAPBPPLLPBB
U	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	37.5	L2	8	L2-8-2	24	YRGAALLG	BLGDBPPA
U	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	21	QQYDTYPGT	PPBABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019