PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6E8V

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	61.5	H1	13	H1-13-1	21	TASGFSLSDKAVG	PBBLBBAADBPBB
A	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	55.6	H2	9	H2-9-1	13	SIDTGGSTG	BBPAALPBB
B	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	76.9	L1	13	L1-13-1	39	SGSSSNVGNGYVS	BBBADDAAALBPB
B	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	87.5	L2	8	L2-8-1	11	YGDTSRAS	BLGDPPPP
B	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV	-1	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBPBLBADBBB
E	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	61.5	H1	13	H1-13-1	22	TASGFSLSDKAVG	BPBLBBAADBPBB
E	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	55.6	H2	9	H2-9-1	11	SIDTGGSTG	BBPAALPBB
E	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV	-1	H3	19	H3-19-*	-1	TTVHQYTHKRCPDGYTYGY	BBBBBBPPPBBPADPBPBB
F	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	76.9	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBPADDAAALBPB
F	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	87.5	L2	8	L2-8-1	14	YGDTSRAS	BLLDPPPP
F	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV	-1	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBPBLBADBBB
H	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	61.5	H1	13	H1-13-1	21	TASGFSLSDKAVG	PPBLBBAADBPBB
H	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	55.6	H2	9	H2-9-1	13	SIDTGGSTG	BBPAALPPB
H	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV	-1	H3	19	H3-19-*	-1	TTVHQYTHKRCPDGYTYGY	BPBBBBPPPBBPADBBPBB
J	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	61.5	H1	13	H1-13-1	19	TASGFSLSDKAVG	PBBLBBAADBPBB
J	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	55.6	H2	9	H2-9-1	12	SIDTGGSTG	BBPAALPBB
K	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	76.9	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBADDAAAGLPB
K	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	87.5	L2	8	L2-8-1	12	YGDTSRAS	BLGDPPPP
K	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV	-1	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBPBLBADBBB
L	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	76.9	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBADDAAAGLPB
L	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	87.5	L2	8	L2-8-1	16	YGDTSRAS	BLLDPPPP
L	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV	-1	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBPBLBADBBB
O	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	61.5	H1	13	H1-13-1	20	TASGFSLSDKAVG	BBBLBPAADBPBB
O	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	55.6	H2	9	H2-9-1	12	SIDTGGSTG	BBPAALPBB
P	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	76.9	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBADDAAALBPB
P	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	87.5	L2	8	L2-8-1	13	YGDTSRAS	BLGDPPPP
P	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV	-1	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBPBLBADBBB
U	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	61.5	H1	13	H1-13-1	24	TASGFSLSDKAVG	PPBLBBADDBPBB
U	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	55.6	H2	9	H2-9-1	8	SIDTGGSTG	BBPAALPBB
U	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV	-1	H3	19	H3-19-*	-1	TTVHQYTHKRCPDGYTYGY	BPBBBBBPPBBPPLBBPBB
V	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	76.9	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBPADDAAAGLPB
V	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	87.5	L2	8	L2-8-1	14	YGDTSRAS	BLLDPPPP
V	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV	-1	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBPBLBADBBB
Y	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	61.5	H1	13	H1-13-1	21	TASGFSLSDKAVG	PPBLBBAADBPBB
Y	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	55.6	H2	9	H2-9-1	11	SIDTGGSTG	BBPAALPBB
Z	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	76.9	L1	13	L1-13-1	39	SGSSSNVGNGYVS	BBBAADAAALPPB
Z	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	87.5	L2	8	L2-8-1	14	YGDTSRAS	BLGDPPPP
Z	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV	-1	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBPBLBADBBB
c	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	61.5	H1	13	H1-13-1	23	TASGFSLSDKAVG	PBBLBBADDBPBB
c	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV1S4*01	55.6	H2	9	H2-9-1	10	SIDTGGSTG	BBPAALPBB
c	heavy	Bos.taurus	Sh_IGHV1S4*01	87.7	Sh_IGHV	-1	H3	19	H3-19-*	-1	TTVHQYTHKRCPDGYTYGY	BPBBBBBPPBBPPLBBPBB
d	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	76.9	L1	13	L1-13-*	-1	SGSSSNVGNGYVS	BBBAADAAALBPB
d	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV1S8*01	87.5	L2	8	L2-8-1	15	YGDTSRAS	BLGDPPPP
d	lambda	Bos.taurus	Sh_IGLV1S8*01	91	Sh_IGLV	-1	L3	11	L3-11-*	-1	ASAEDSSSNAV	BBPBLBADBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019