PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6DWI

#CDRs = 6; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	72.7	L1	11	L1-11-1	9	RASQSVRTNVA	BPABPDGDPBB
A	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-2	14	SGASTRAS	BLLDPPPA
A	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	LQYNTWPRT	BBDABBpPB
B	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	61.5	H1	13	H1-13-1	12	AASGFTFNTNDMS	PBBLBPAADPPBB
B	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	20	H2	10	H2-10-1	14	TIIGIDDTTH	BBPAADLPBB
B	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV	-1	H3	9	H3-9-*	-1	VKNSGIYSF	BPGADPPAB
C	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	72.7	L1	11	L1-11-1	8	RASQSVRTNVA	BPABPDGDPBB
C	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-2	16	SGASTRAS	BLLDPPPA
C	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	LQYNTWPRT	BPDABBpPB
D	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	61.5	H1	13	H1-13-1	13	AASGFTFNTNDMS	PBBLBPAADBPBB
D	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	20	H2	10	H2-10-1	14	TIIGIDDTTH	BBPAADLPBB
D	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV	-1	H3	9	H3-9-cis5-*	-1	VKNSGIYSF	BPGAgPPAB
E	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	72.7	L1	11	L1-11-1	10	RASQSVRTNVA	BPABPDGDPBB
E	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-2	18	SGASTRAS	BLLDPPPA
E	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	LQYNTWPRT	BBDABBpPB
F	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	61.5	H1	13	H1-13-1	13	AASGFTFNTNDMS	PBBLBPAADBPBB
F	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	20	H2	10	H2-10-1	15	TIIGIDDTTH	BBPAADLPBB
F	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV	-1	H3	9	H3-9-*	-1	VKNSGIYSF	BPGADPBAP
G	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	72.7	L1	11	L1-11-1	6	RASQSVRTNVA	BPABPDGDPBB
G	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-2	15	SGASTRAS	BLLDPPPA
G	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	LQYNTWPRT	BBDABBpPB
H	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	61.5	H1	13	H1-13-1	13	AASGFTFNTNDMS	BPBLBPAADPPBB
H	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	20	H2	10	H2-10-1	16	TIIGIDDTTH	BBPAADLPBB
H	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV	-1	H3	9	H3-9-cis5-*	-1	VKNSGIYSF	BPGAgBPAB
I	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	72.7	L1	11	L1-11-1	8	RASQSVRTNVA	BPABPDGDPBB
I	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-2	14	SGASTRAS	BLLDPPPA
I	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	14	LQYNTWPRT	BBDABBpPB
J	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	61.5	H1	13	H1-13-1	14	AASGFTFNTNDMS	BPBLBPAADPPBB
J	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	20	H2	10	H2-10-1	14	TIIGIDDTTH	BBPAADLPBB
J	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV	-1	H3	9	H3-9-*	-1	VKNSGIYSF	BPGADPPAB
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	72.7	L1	11	L1-11-1	13	RASQSVRTNVA	BPABPDGDPBB
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-2	18	SGASTRAS	BLLDPPPA
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	16	LQYNTWPRT	BPDDBBpPB
L	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	61.5	H1	13	H1-13-1	19	AASGFTFNTNDMS	PBBLBPAAAPPBB
L	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	20	H2	10	H2-10-1	18	TIIGIDDTTH	BBPAADLPBB
L	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV	-1	H3	9	H3-9-*	-1	VKNSGIYSF	BPGADPPAB
M	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	72.7	L1	11	L1-11-1	6	RASQSVRTNVA	BPABPDGDPBB
M	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-2	13	SGASTRAS	BLLDPPPA
M	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	14	LQYNTWPRT	BPDABBpPB
N	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	61.5	H1	13	H1-13-1	14	AASGFTFNTNDMS	PPBLBPAADBPBB
N	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	20	H2	10	H2-10-1	13	TIIGIDDTTH	BBPAADLPBB
N	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV	-1	H3	9	H3-9-*	-1	VKNSGIYSF	BPGDDPPAB
O	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	72.7	L1	11	L1-11-1	8	RASQSVRTNVA	BPABPDGDPBB
O	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-1	7	SGASTRAS	BLLDPPPP
O	kappa	Homo.sapiens	Hu_IGKV3D-15*01	81.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	LQYNTWPRT	BBDABBpPB
P	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	61.5	H1	13	H1-13-1	12	AASGFTFNTNDMS	PPBLBPAADPPBB
P	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV3-NL1*01	20	H2	10	H2-10-1	16	TIIGIDDTTH	BBPAADLPBB
P	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	82.2	Hu_IGHV	-1	H3	9	H3-9-*	-1	VKNSGIYSF	BPGADPPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019