PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6CHB

#CDRs = 6; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-2*03	79.5	Hu_IGHV1-2*03	76.9	H1	13	H1-13-4	36	TASGYKFTGYHMH	BBBLBPDPLPPBB
D	heavy	Homo.sapiens	Hu_IGHV1-2*03	79.5	Hu_IGHV1-2*03	50	H2	10	H2-10-6	19	WINPFRGAVK	BBPAPLLPBB
D	heavy	Homo.sapiens	Hu_IGHV1-2*03	79.5	Hu_IGHV	-1	H3	19	H3-19-cis13-*	-1	AREMFDSSADWSPWRGMVA	BBPAPBBADPBGbDBLPAP
E	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV2-23*01	57.1	L1	14	L1-14-2	32	AGSSRDVGGFDLVS	BBBADDDADBAAPB
E	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV2-23*01	75	L2	8	L2-8-1	18	YEVNKRPS	BLGBBBPP
E	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV	-1	L3	8	L3-8-*	-1	YSYADGVA	BBBBGBBB
I	heavy	Homo.sapiens	Hu_IGHV4-61*01	75.3	Mo_IGHV3-1*02	42.9	H1	14	H1-14-*	-1	TVSQDSRPSDHSWT	PPBLBDBDAABPPB
I	heavy	Homo.sapiens	Hu_IGHV4-61*01	75.3	Mo_IGHV3-1*02	55.6	H2	9	H2-9-1	23	DIHYNGATT	BBPAALPPB
I	heavy	Homo.sapiens	Hu_IGHV4-61*01	75.3	Mo_IGHV	-1	H3	23	H3-23-*	-1	ARNAIRIYGVVALGEWFHYGMDV	BBPPBBBDBBAADLPBBPAGPAB
J	heavy	Homo.sapiens	Hu_IGHV4-61*01	75.3	Mo_IGHV3-1*02	42.9	H1	14	H1-14-*	-1	TVSQDSRPSDHSWT	PBPLBDBDAABBPB
J	heavy	Homo.sapiens	Hu_IGHV4-61*01	75.3	Mo_IGHV3-1*02	55.6	H2	9	H2-9-1	23	DIHYNGATT	BBPAALPPP
J	heavy	Homo.sapiens	Hu_IGHV4-61*01	75.3	Mo_IGHV	-1	H3	23	H3-23-*	-1	ARNAIRIYGVVALGEWFHYGMDV	BBPPBBBDDBAAALDBBPAGPAB
K	lambda	Homo.sapiens	Hu_IGLV3-25*01	84.8	Hu_IGLV3-25*01	36.4	L1	11	L1-11-*	-1	SGAPLTSRFTY	BBAAAADBPBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*01	84.8	Hu_IGLV	-1	L3	11	L3-11-*	-1	QSSDTSDSYKM	BBPPAALABBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*01	84.8	Hu_IGLV3-25*01	36.4	L1	11	L1-11-*	-1	SGAPLTSRFTY	BBAAAADBPBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*01	84.8	Hu_IGLV	-1	L3	11	L3-11-*	-1	QSSDTSDSYKM	BBBPADLDBBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*03	79.5	Hu_IGHV1-2*03	76.9	H1	13	H1-13-1	18	TASGYKFTGYHMH	PBBLBPAADBPBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*03	79.5	Hu_IGHV1-2*03	50	H2	10	H2-10-6	13	WINPFRGAVK	BBPAPLLPBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*03	79.5	Hu_IGHV	-1	H3	19	H3-19-cis13-*	-1	AREMFDSSADWSPWRGMVA	BBPABBBDDPBGbDBLBAP
N	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV2-23*01	57.1	L1	14	L1-14-2	25	AGSSRDVGGFDLVS	BBBAADDADBABBB
N	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV2-23*01	75	L2	8	L2-8-1	26	YEVNKRPS	BLGBBBPP
N	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV	-1	L3	8	L3-8-*	-1	YSYADGVA	BBPBGABP
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	79.5	Hu_IGHV1-2*03	76.9	H1	13	H1-13-1	26	TASGYKFTGYHMH	PPBLBPAAABPBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	79.5	Hu_IGHV1-2*03	50	H2	10	H2-10-6	19	WINPFRGAVK	BBPAPLLPBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	79.5	Hu_IGHV	-1	H3	19	H3-19-cis13-*	-1	AREMFDSSADWSPWRGMVA	BBPAPBBDDBPGbDBLPDP
P	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV2-23*01	57.1	L1	14	L1-14-2	19	AGSSRDVGGFDLVS	BBBADPAAABBDPB
P	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV2-23*01	75	L2	8	L2-8-1	28	YEVNKRPS	BLGBBPPP
P	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV	-1	L3	8	L3-8-*	-1	YSYADGVA	BBPBGBBB
Q	heavy	Homo.sapiens	Hu_IGHV4-61*01	75.3	Mo_IGHV3-1*02	42.9	H1	14	H1-14-*	-1	TVSQDSRPSDHSWT	PBBLBABAAABPBB
Q	heavy	Homo.sapiens	Hu_IGHV4-61*01	75.3	Mo_IGHV3-1*02	55.6	H2	9	H2-9-1	11	DIHYNGATT	BBPAALPBB
Q	heavy	Homo.sapiens	Hu_IGHV4-61*01	75.3	Mo_IGHV	-1	H3	23	H3-23-*	-1	ARNAIRIYGVVALGEWFHYGMDV	BBPPBBBDBBAADLPBBPAGPAP
R	lambda	Homo.sapiens	Hu_IGLV3-25*01	84.8	Hu_IGLV3-25*01	36.4	L1	11	L1-11-*	-1	SGAPLTSRFTY	BBAAAADBBBB
R	lambda	Homo.sapiens	Hu_IGLV3-25*01	84.8	Hu_IGLV	-1	L3	11	L3-11-*	-1	QSSDTSDSYKM	BBBPAALABBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019