PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6BPE

#CDRs = 6; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV5-16*01	94.5	Mo_IGHV5-16*01	100	H1	13	H1-13-1	13	TASGFTFSDYYMA	BBBLBPAAABPBB
B	heavy	Mus.musculus	Mo_IGHV5-16*01	94.5	Mo_IGHV5-16*01	60	H2	10	H2-10-2	16	SVSYDGSITY	BBPAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-16*01	94.5	Mo_IGHV	-1	H3	11	H3-11-*	-1	TRVTVVDSFDY	BPBPAALPPAB
C	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	100	L1	11	L1-11-1	31	KASQNVGTNVA	BBABPDGAPBB
C	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	17	YSASYRNS	BLGDBBPP
C	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	19	QQYDSYPYP	BBAABPpPB
E	heavy	Mus.musculus	Mo_IGHV5-16*01	94.5	Mo_IGHV5-16*01	100	H1	13	H1-13-1	17	TASGFTFSDYYMA	PBBLBPAAABPBB
E	heavy	Mus.musculus	Mo_IGHV5-16*01	94.5	Mo_IGHV5-16*01	60	H2	10	H2-10-2	15	SVSYDGSITY	BBPAALABBB
E	heavy	Mus.musculus	Mo_IGHV5-16*01	94.5	Mo_IGHV	-1	H3	11	H3-11-*	-1	TRVTVVDSFDY	BPBPAALPBAB
F	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	100	L1	11	L1-11-1	12	KASQNVGTNVA	BBABPDGAPBB
F	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	20	YSASYRNS	BLLDBBPP
F	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-3	18	QQYDSYPYP	BBDABPaLP
H	heavy	Mus.musculus	Mo_IGHV5-16*01	94.5	Mo_IGHV5-16*01	100	H1	13	H1-13-1	20	TASGFTFSDYYMA	PBBLBPAADBPBB
H	heavy	Mus.musculus	Mo_IGHV5-16*01	94.5	Mo_IGHV5-16*01	60	H2	10	H2-10-2	14	SVSYDGSITY	BBPAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-16*01	94.5	Mo_IGHV	-1	H3	11	H3-11-*	-1	TRVTVVDSFDY	BBPPAALPBAB
I	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	100	L1	11	L1-11-*	-1	KASQNVGTNVA	BBDBBABBDPB
I	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	25	YSASYRNS	BLGAPBPP

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019