PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6B3M

#CDRs = 5; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	69.2	H1	13	H1-13-cis4-*	-1	RASGGIFRSNAIS	PPBlABPPDBPPB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	70	H2	10	H2-10-1	22	NIIAVFGTAN	BBPAADLPBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	13	RASQSVSSNYLA	PBABPPPLLBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	8	YGASNRAT	BLGDPPPP
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYGTSPRT	BBDABPpPB
I	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	69.2	H1	13	H1-13-cis4-*	-1	RASGGIFRSNAIS	PPBlABPPDBPPB
I	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	70	H2	10	H2-10-1	22	NIIAVFGTAN	BBPAADLPBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	13	RASQSVSSNYLA	PBABPPPLLBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	8	YGASNRAT	BLGDPPPP
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYGTSPRT	BBDABPpPB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	69.2	H1	13	H1-13-cis4-*	-1	RASGGIFRSNAIS	PPBlABPPDBPPB
M	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	70	H2	10	H2-10-1	22	NIIAVFGTAN	BBPAADLPBB
N	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	13	RASQSVSSNYLA	PBABPPPLLBBB
N	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	8	YGASNRAT	BLGDPPPP
N	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYGTSPRT	BBDABPpPB
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	69.2	H1	13	H1-13-cis4-*	-1	RASGGIFRSNAIS	PPBlABPPDBPPB
O	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	70	H2	10	H2-10-1	22	NIIAVFGTAN	BBPAADLPBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	13	RASQSVSSNYLA	PBABPPPLLBBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	8	YGASNRAT	BLGDPPPP
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYGTSPRT	BBDABPpPB
U	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	13	RASQSVSSNYLA	PBABPPPLLBBB
U	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	8	YGASNRAT	BLGDPPPP
U	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYGTSPRT	BBDABPpPB
V	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	69.2	H1	13	H1-13-cis4-*	-1	RASGGIFRSNAIS	PPBlABPPDBPPB
V	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	70	H2	10	H2-10-1	22	NIIAVFGTAN	BBPAADLPBB
W	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	13	RASQSVSSNYLA	PBABPPPLLBBB
W	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	8	YGASNRAT	BLGDPPPP
W	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYGTSPRT	BBDABPpPB
Y	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	69.2	H1	13	H1-13-cis4-*	-1	RASGGIFRSNAIS	PPBlABPPDBPPB
Y	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	70	H2	10	H2-10-1	22	NIIAVFGTAN	BBPAADLPBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019