PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6APD

#CDRs = 6; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-24*01	82.2	Hu_IGHV1-24*01	61.5	H1	13	H1-13-1	19	KISGHTLIKLSIH	PBBLBPAADBBBB
D	heavy	Homo.sapiens	Hu_IGHV1-24*01	82.2	Hu_IGHV1-24*01	30	H2	10	H2-10-1	19	GYEGEVDEIF	BBBAADLBBB
D	heavy	Homo.sapiens	Hu_IGHV1-24*01	82.2	Hu_IGHV	-1	H3	17	H3-17-*	-1	GTLGVTVTEAGLGIDDY	BBAPBPBBAABBBBPBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-1	14	RASQIVSRNHLA	BBABPBPAAAPB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	20	FGASSRAT	BLGBBPPP
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV	-1	L3	9	L3-9-1	29	LSSDSSIFT	BBBBLLBPB
F	heavy	Homo.sapiens	Hu_IGHV1-24*01	82.2	Hu_IGHV1-24*01	61.5	H1	13	H1-13-1	20	KISGHTLIKLSIH	PBBLBPAADBBBB
F	heavy	Homo.sapiens	Hu_IGHV1-24*01	82.2	Hu_IGHV1-24*01	30	H2	10	H2-10-1	19	GYEGEVDEIF	BBBAADLBBB
F	heavy	Homo.sapiens	Hu_IGHV1-24*01	82.2	Hu_IGHV	-1	H3	17	H3-17-*	-1	GTLGVTVTEAGLGIDDY	BBAPBPBBAABBBBBBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-1	14	RASQIVSRNHLA	BBABPBPAAAPB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	20	FGASSRAT	BLGBBPPP
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV	-1	L3	9	L3-9-1	28	LSSDSSIFT	BBBBLLBPB
H	heavy	Homo.sapiens	Hu_IGHV1-24*01	82.2	Hu_IGHV1-24*01	61.5	H1	13	H1-13-1	19	KISGHTLIKLSIH	PBBLBPAADBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-24*01	82.2	Hu_IGHV1-24*01	30	H2	10	H2-10-1	19	GYEGEVDEIF	BBBAADLBBB
H	heavy	Homo.sapiens	Hu_IGHV1-24*01	82.2	Hu_IGHV	-1	H3	17	H3-17-*	-1	GTLGVTVTEAGLGIDDY	BBAPBPBBAABBBBBBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	66.7	L1	12	L1-12-1	14	RASQIVSRNHLA	BBABPBPAAAPB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	20	FGASSRAT	BLGBBPPP
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV	-1	L3	9	L3-9-1	29	LSSDSSIFT	BBBBLLBPB
J	heavy	Homo.sapiens	Hu_IGHV3-21*01	100	Hu_IGHV3-21*01	100	H1	13	H1-13-1	12	AASGFTFSSYSMN	BBBLBPAADBPBB
J	heavy	Homo.sapiens	Hu_IGHV3-21*01	100	Hu_IGHV3-21*01	100	H2	10	H2-10-2	14	SISSSSSYIY	BBPADLABBB
J	heavy	Homo.sapiens	Hu_IGHV3-21*01	100	Hu_IGHV	-1	H3	15	H3-15-*	-1	ARLGYCSGGSCHFDY	BPPPPBABGLPBPAB
K	heavy	Homo.sapiens	Hu_IGHV3-21*01	100	Hu_IGHV3-21*01	100	H1	13	H1-13-1	11	AASGFTFSSYSMN	BBBLBPAADBPBB
K	heavy	Homo.sapiens	Hu_IGHV3-21*01	100	Hu_IGHV3-21*01	100	H2	10	H2-10-2	14	SISSSSSYIY	BBPADLABBB
K	heavy	Homo.sapiens	Hu_IGHV3-21*01	100	Hu_IGHV	-1	H3	15	H3-15-*	-1	ARLGYCSGGSCHFDY	BPPPPBABGLPBPAB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100	Hu_IGLV1-40*01	100	L1	14	L1-14-*	-1	TGSSSNIGAGYDVH	PBBAADAAALPPBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100	Hu_IGLV1-40*01	100	L2	8	L2-8-1	10	YGNSNRPS	BLLDBPPP
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDSSLSGFYV	BBBBAPLLGBPB
M	lambda	Homo.sapiens	Hu_IGLV1-40*01	100	Hu_IGLV1-40*01	100	L1	14	L1-14-*	-1	TGSSSNIGAGYDVH	PBBAADAAALPPBB
M	lambda	Homo.sapiens	Hu_IGLV1-40*01	100	Hu_IGLV1-40*01	100	L2	8	L2-8-1	10	YGNSNRPS	BLLDBPPP
M	lambda	Homo.sapiens	Hu_IGLV1-40*01	100	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDSSLSGFYV	BBBBAPLLGBPB
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	100	Hu_IGHV3-21*01	100	H1	13	H1-13-1	11	AASGFTFSSYSMN	BBBLBPAADBPBB
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	100	Hu_IGHV3-21*01	100	H2	10	H2-10-2	14	SISSSSSYIY	BBPADLABBB
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	100	Hu_IGHV	-1	H3	15	H3-15-*	-1	ARLGYCSGGSCHFDY	BPPPPBABGLPBPAB
O	lambda	Homo.sapiens	Hu_IGLV1-40*01	100	Hu_IGLV1-40*01	100	L1	14	L1-14-*	-1	TGSSSNIGAGYDVH	PBBAADAAALPPBB
O	lambda	Homo.sapiens	Hu_IGLV1-40*01	100	Hu_IGLV1-40*01	100	L2	8	L2-8-1	10	YGNSNRPS	BLLDBPPP
O	lambda	Homo.sapiens	Hu_IGLV1-40*01	100	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDSSLSGFYV	BBBBAPLLGBPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019