PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6AMJ

#CDRs = 5; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	94.1	Hu_IGKV1-6*01	81.8	L1	11	L1-11-1	8	RASQGIGDDLG	BPABPDGDPBB
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	94.1	Hu_IGKV1-6*01	62.5	L2	8	L2-8-1	11	YGTSTLQS	BLGDPPPP
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	94.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	9	LQDSNYPLT	BBDABBpPB
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	92.3	H1	13	H1-13-1	16	AASGFTFSSYGMH	PBBGBPAADBPBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	90	H2	10	H2-10-2	10	VISYDGSIKY	BBPAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	92.3	H1	13	H1-13-1	8	AASGFTFSSYGMH	PBBLBPAADBPBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	97.3	Hu_IGHV3-30*01	90	H2	10	H2-10-2	11	VISYDGSIKY	BBPAALABBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	94.1	Hu_IGKV1-6*01	81.8	L1	11	L1-11-1	7	RASQGIGDDLG	BPABPDGDPBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	94.1	Hu_IGKV1-6*01	62.5	L2	8	L2-8-1	8	YGTSTLQS	BLGDPPPP
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	94.1	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	LQDSNYPLT	BBDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019