PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5YOY

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	7	RASQSVYSYLA	BBABPDGDPBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	7	YDASNRAT	BLGDPPPP
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	10	L3-10-cis7-*	-1	QQRSNWPPFT	BPDPDBpPLP
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	8	RASQSVYSYLA	BBABPDGDPBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	7	YDASNRAT	BLGDPPPP
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	10	L3-10-cis7-*	-1	QQRSNWPPFT	BPDPDBpPLP
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	7	RASQSVYSYLA	BBABPDGDPBB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	8	YDASNRAT	BLGDPPPP
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	10	L3-10-cis7-*	-1	QQRSNWPPFT	BPDPDBpPLP
G	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	92.3	H1	13	H1-13-1	11	AASGFIFSSYAMH	PPBLBPAADBPBB
G	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	70	H2	10	H2-10-2	11	FMSYDGSNKK	BBPADLABBB
G	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARDRGIAAGGNYYYYGMDV	BPBALPBBLLDBBPGBPAB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	92.3	H1	13	H1-13-1	11	AASGFIFSSYAMH	PBBLBPAADBPBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	70	H2	10	H2-10-2	12	FMSYDGSNKK	BBPADLABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARDRGIAAGGNYYYYGMDV	BPBALPBBLLDBBPGBPAB
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	92.3	H1	13	H1-13-1	11	AASGFIFSSYAMH	PBBLBPAADBPBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	70	H2	10	H2-10-2	11	FMSYDGSNKK	BBPADLABBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARDRGIAAGGNYYYYGMDV	BPBALPBBLLDBBPGBPAB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	8	RASQSVYSYLA	BBABPDGDPBB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	7	YDASNRAT	BLGDPPPP
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	10	L3-10-cis7-*	-1	QQRSNWPPFT	BPDPDBpPLP
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	8	RASQSVYSYLA	BBABPDGDPBB
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	8	YDASNRAT	BLGDPPPP
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	10	L3-10-cis7-*	-1	QQRSNWPPFT	BPDPDBpPLP
O	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	8	RASQSVYSYLA	BBABPDGDPBB
O	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	8	YDASNRAT	BLGDPPPP
O	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	10	L3-10-cis7-*	-1	QQRSNWPPFT	BPDPDBpPLP
P	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	92.3	H1	13	H1-13-1	10	AASGFIFSSYAMH	PBBLBPAADBPBB
P	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	70	H2	10	H2-10-2	12	FMSYDGSNKK	BBPADLABBB
P	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARDRGIAAGGNYYYYGMDV	BPBALPBBLLDBBPGBPAB
Q	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	92.3	H1	13	H1-13-1	10	AASGFIFSSYAMH	PBBLBPAADBPBB
Q	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	70	H2	10	H2-10-2	11	FMSYDGSNKK	BBPADLABBB
Q	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARDRGIAAGGNYYYYGMDV	BPBALPBBLLDBBPGBPAB
R	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	92.3	H1	13	H1-13-1	11	AASGFIFSSYAMH	PPBLBPAADBPBB
R	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV3-30*01	70	H2	10	H2-10-2	12	FMSYDGSNKK	BBPADLABBB
R	heavy	Homo.sapiens	Hu_IGHV3-30*01	98.6	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARDRGIAAGGNYYYYGMDV	BPBALPBBLLDBBPGBPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019