PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5Y2K

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	76.9	H1	13	H1-13-1	11	EASGFTSSAYAMH	PPBLBBAADBPBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	50	H2	10	H2-10-2	12	VITFDGGYQY	BBPAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV	-1	H3	21	H3-21-cis10-*	-1	ARDPLTKLLPFDWVSGGYFDY	BBBAAPDPBpPABPPDPBBAB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV3-1*01	100	L1	11	L1-11-3	10	SGDKLGDKYAC	BBPLAAABPBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV3-1*01	100	L2	8	L2-8-1	17	YQDSKRPS	BLLDPBPP
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV	-1	L3	9	L3-9-*	-1	QAWDSSTVV	BBBBGAPPB
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	76.9	H1	13	H1-13-1	12	EASGFTSSAYAMH	PPBLBPAAABPBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	50	H2	10	H2-10-2	39	VITFDGGYQY	BBPAAGLBPB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV3-1*01	100	L1	11	L1-11-3	37	SGDKLGDKYAC	BBADAAABPBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV3-1*01	100	L2	8	L2-8-1	18	YQDSKRPS	BLLDPBPP
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV	-1	L3	9	L3-9-*	-1	QAWDSSTVV	BBBBGAPPB
E	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	76.9	H1	13	H1-13-1	9	EASGFTSSAYAMH	PPBLBPAADBPBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	50	H2	10	H2-10-2	8	VITFDGGYQY	BBPAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV	-1	H3	21	H3-21-*	-1	ARDPLTKLLPFDWVSGGYFDY	BPBADPDPPPADBPPAPBBAB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV3-1*01	100	L1	11	L1-11-3	11	SGDKLGDKYAC	BBPLAAABPPB
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV3-1*01	100	L2	8	L2-8-1	11	YQDSKRPS	BLLDPPPP
F	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV	-1	L3	9	L3-9-*	-1	QAWDSSTVV	BBPBGAPPB
G	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	76.9	H1	13	H1-13-1	10	EASGFTSSAYAMH	PPBLBPAAABPBB
G	heavy	Homo.sapiens	Hu_IGHV3-30*01	93.2	Hu_IGHV3-30*01	50	H2	10	H2-10-2	8	VITFDGGYQY	BBPAALABBB
H	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV3-1*01	100	L1	11	L1-11-3	9	SGDKLGDKYAC	BBPLAAAPBPB
H	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV3-1*01	100	L2	8	L2-8-1	18	YQDSKRPS	BLLDPBPP
H	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV	-1	L3	9	L3-9-*	-1	QAWDSSTVV	BBBBGAPPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019