PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5W08

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	PPBLBPAADBPBP
G	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	80	H2	10	H2-10-1	11	WINPNTGDTN	BBPAAALPBB
G	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKDLTLMYVFDSGWARGAHDYYGMDV	BPPAPPDBBAAALBBPABPBPDGBAB
H	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	71.4	L1	14	L1-14-*	-1	TGTNSDVGTFDLVS	BBDBLBADDBAAPB
H	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	87.5	L2	8	L2-8-1	15	YEGSRRPS	BLLDPBPP
H	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV	-1	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBPB
I	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	PPBLBPAADBPBP
I	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	80	H2	10	H2-10-1	11	WINPNTGDTN	BBPAAALPBB
I	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKDLTLMYVFDSGWARGAHDYYGMDV	BPPAPPDBBAAALBBPABPBPDGBAB
J	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	71.4	L1	14	L1-14-*	-1	TGTNSDVGTFDLVS	BBBBLBADDBALPB
J	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	87.5	L2	8	L2-8-1	15	YEGSRRPS	BLLDPBPP
J	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV	-1	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBPB
K	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	PPBLBPAADBPBP
K	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	80	H2	10	H2-10-1	12	WINPNTGDTN	BBPAAALPBB
K	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKDLTLMYVFDSGWARGAHDYYGMDV	BPPAPPDBBAAALBBPABPBPDGBAB
L	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	71.4	L1	14	L1-14-*	-1	TGTNSDVGTFDLVS	BBBGLBADDBAAPB
L	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	87.5	L2	8	L2-8-1	15	YEGSRRPS	BLLDPBPP
L	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV	-1	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBPB
M	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	PPBLBPAADBPBP
M	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	80	H2	10	H2-10-1	11	WINPNTGDTN	BBPAAALPBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKDLTLMYVFDSGWARGAHDYYGMDV	BPPAPPDBBAAALBBPABPBPDGBAB
N	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	71.4	L1	14	L1-14-*	-1	TGTNSDVGTFDLVS	BBBBLBABDBAAPB
N	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	87.5	L2	8	L2-8-1	15	YEGSRRPS	BLLDPBPP
N	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV	-1	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBPB
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	PPBLBPAADBPBP
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	80	H2	10	H2-10-1	12	WINPNTGDTN	BBPAAALPBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKDLTLMYVFDSGWARGAHDYYGMDV	BPPAPPDBBAAALBBPABPBPDGBAB
P	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	71.4	L1	14	L1-14-2	36	TGTNSDVGTFDLVS	BBDDBDADABAAPB
P	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	87.5	L2	8	L2-8-1	14	YEGSRRPS	BLLDPBPP
P	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV	-1	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBPB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	76.9	H1	13	H1-13-1	8	KTSGYTFTAYYLH	PPBLBPAADBPBP
Q	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	80	H2	10	H2-10-1	12	WINPNTGDTN	BBPAAALPBB
Q	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKDLTLMYVFDSGWARGAHDYYGMDV	BPPAPPDBBAAALBBPABPBPDGBAB
R	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	71.4	L1	14	L1-14-2	31	TGTNSDVGTFDLVS	BBBAABLDDBDAPB
R	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV2-23*01	87.5	L2	8	L2-8-1	15	YEGSRRPS	BLLDPBPP
R	lambda	Homo.sapiens	Hu_IGLV2-23*01	94	Hu_IGLV	-1	L3	8	L3-8-*	-1	SSYAGSVV	BBBBLBPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019