PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5VTA

#CDRs = 6; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV4-72*01	80	L1	10	L1-10-1	12	RASSSVCNMH	BPABPBABBB
E	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV4-72*01	75	L2	8	L2-8-1	14	HGTSNLAS	BLGDPPPP
E	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQWSNHPPT	BBDABPpPB
F	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV1-39*01	92.3	H1	13	H1-13-1	11	KASGYSFTDYNIN	BPBLBPAAABPBB
F	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV1-39*01	60	H2	10	H2-10-1	13	VVIPKYGTTN	BBPAADLPBB
F	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV	-1	H3	9	H3-9-*	-1	TRFRVFFDV	BBBBLBPAB
G	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV4-72*01	80	L1	10	L1-10-1	17	RASSSVCNMH	PBABPBABBP
G	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV4-72*01	75	L2	8	L2-8-4	32	HGTSNLAS	BGDAPBPP
G	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QQWSNHPPT	BBDABBpPB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV1-39*01	92.3	H1	13	H1-13-1	17	KASGYSFTDYNIN	PBBLBPAADBBBB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV1-39*01	60	H2	10	H2-10-1	12	VVIPKYGTTN	BBPAADLPBB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV	-1	H3	9	H3-9-*	-1	TRFRVFFDV	BPBBGBPAB
I	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV1-39*01	92.3	H1	13	H1-13-1	13	KASGYSFTDYNIN	PBBLBPAAABPBB
I	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV1-39*01	60	H2	10	H2-10-1	14	VVIPKYGTTN	BBPAADLPBB
I	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV	-1	H3	9	H3-9-2	25	TRFRVFFDV	BPBADBPAB
J	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV4-72*01	80	L1	10	L1-10-1	10	RASSSVCNMH	BPABPBABBB
J	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV4-72*01	75	L2	8	L2-8-1	10	HGTSNLAS	BLGDPPPP
J	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	9	QQWSNHPPT	BBDABBpPB
K	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV1-39*01	60	H2	10	H2-10-1	38	VVIPKYGTTN	BBPAABAPBB
K	heavy	Mus.musculus	Mo_IGHV1-39*01	95.9	Mo_IGHV	-1	H3	9	H3-9-*	-1	TRFRVFFDV	BBBBLBPAB
L	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV4-72*01	80	L1	10	L1-10-1	9	RASSSVCNMH	BBABPBABBB
L	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV4-72*01	75	L2	8	L2-8-2	34	HGTSNLAS	BLGDBPBG
L	kappa	Mus.musculus	Mo_IGKV4-72*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQWSNHPPT	BBDABBpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019