PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5THR

#CDRs = 6; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
J	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	81.8	L1	11	L1-11-1	33	RASESVSSDLA	PBDBPDLDBBB
J	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	100	L2	8	L2-8-1	30	YGASTRAT	BLLDBPBP
J	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	L3	11	L3-11-cis7-1	19	QQYNNWPPRYT	BPDDPBpPDPP
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	81.8	L1	11	L1-11-1	33	RASESVSSDLA	PBDBPDLDBBB
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	100	L2	8	L2-8-1	30	YGASTRAT	BLLDBPBP
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	L3	11	L3-11-cis7-1	19	QQYNNWPPRYT	BPDDPBpPDPP
L	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	81.8	L1	11	L1-11-1	33	RASESVSSDLA	PBDBPDLDBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	100	L2	8	L2-8-1	30	YGASTRAT	BLLDBPBP
L	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	L3	11	L3-11-cis7-1	19	QQYNNWPPRYT	BPDDPBpPDPP
M	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	53.8	H1	13	H1-13-1	34	KASGDTFIRYSFT	PBBBPPAAABPPB
M	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	60	H2	10	H2-10-1	30	RIITILDVAH	BBPAAALBPP
M	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV	-1	H3	21	H3-21-*	-1	AGVYEGEADEGEYDNNGFLKH	BBBPAGBADDBPBALPAPBAP
N	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	53.8	H1	13	H1-13-1	34	KASGDTFIRYSFT	PBBBPPAAABPPB
N	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	60	H2	10	H2-10-1	30	RIITILDVAH	BBPAAALBPP
N	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV	-1	H3	21	H3-21-*	-1	AGVYEGEADEGEYDNNGFLKH	BBBPAGBADDBPBALPAPBAP
O	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	53.8	H1	13	H1-13-1	34	KASGDTFIRYSFT	PBBBPPAAABPPB
O	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	60	H2	10	H2-10-1	30	RIITILDVAH	BBPAAALBPP
O	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV	-1	H3	21	H3-21-*	-1	AGVYEGEADEGEYDNNGFLKH	BBBPAGBADDBPBALPAPBAP
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H1	14	H1-14-*	-1	KAYGVNTFGLYAVN	PBPLBABAAABPBP
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H2	8	H2-8-*	-1	QIWRWKSS	BDPLLBPB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	-	-1	H3	22	H3-22-*	-1	TTTSTYDKWSGLHHDGVMAFSS	BBBPDAPDDDLABBLLPPPPAB
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	50	L1	12	L1-12-2	28	RASQSITGNWVA	PBABPBPLLPBP
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	37.5	L2	8	L2-8-2	31	YRGAALLG	PLGDPPBA
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	25	QQYDTYPGT	BPDAPBpPB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H1	14	H1-14-*	-1	KAYGVNTFGLYAVN	PBPLBABAAABPBP
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H2	8	H2-8-*	-1	QIWRWKSS	BDPLLBPB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	-	-1	H3	22	H3-22-*	-1	TTTSTYDKWSGLHHDGVMAFSS	BBBPDAPDDDLABBLLPPPPAB
S	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	50	L1	12	L1-12-2	28	RASQSITGNWVA	PBABPBPLLPBP
S	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	37.5	L2	8	L2-8-2	31	YRGAALLG	PLGDPPBA
S	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	25	QQYDTYPGT	BPDAPBpPB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H1	14	H1-14-*	-1	KAYGVNTFGLYAVN	PBPLBABAAABPBP
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H2	8	H2-8-*	-1	QIWRWKSS	BDPLLBPB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	-	-1	H3	22	H3-22-*	-1	TTTSTYDKWSGLHHDGVMAFSS	BBBPDAPDDDLABBLLPPPPAB
U	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	50	L1	12	L1-12-2	28	RASQSITGNWVA	PBABPBPLLPBP
U	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	37.5	L2	8	L2-8-2	31	YRGAALLG	PLGDPPBA
U	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	25	QQYDTYPGT	BPDAPBpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019