PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5OCL

#CDRs = 3; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	46.2	H1	13	H1-13-1	12	AASGIIFRELGID	PBBLBPAAABPBB
A	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	55.6	H2	9	H2-9-1	8	SIASAGMTN	BBPAALPBB
A	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV	-1	H3	9	H3-9-*	-1	HTLPRFSHL	BBBABABPB
B	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	76.9	H1	13	H1-13-5	11	AASGRTWSIYGMG	PPBGPAAAPDBBB
B	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	50	H2	10	H2-10-1	17	GITWRGGNTH	BBPAAALPBB
B	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV	-1	H3	17	H3-17-*	-1	AANPNPSGSSVYRRNDY	BBLPBAPBABAAAABAB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	46.2	H1	13	H1-13-1	17	AASGIIFRELGID	PBBLBPAAABPBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	55.6	H2	9	H2-9-1	10	SIASAGMTN	BBPADLPBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV	-1	H3	9	H3-9-*	-1	HTLPRFSHL	BBBADDBPB
D	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	76.9	H1	13	H1-13-5	9	AASGRTWSIYGMG	BPBGPAAAPDBBB
D	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	50	H2	10	H2-10-1	18	GITWRGGNTH	BBPAAALPBB
E	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	76.9	H1	13	H1-13-5	11	AASGRTWSIYGMG	BPBGPAAAPDBBB
E	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	50	H2	10	H2-10-1	19	GITWRGGNTH	BBPAAALPBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	46.2	H1	13	H1-13-1	19	AASGIIFRELGID	PPBLBBAAABPBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	55.6	H2	9	H2-9-1	9	SIASAGMTN	BBPAALPBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV	-1	H3	9	H3-9-*	-1	HTLPRFSHL	BBBADDBPB
G	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	76.9	H1	13	H1-13-5	10	AASGRTWSIYGMG	PPBGPAAAPDBBB
G	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	50	H2	10	H2-10-1	17	GITWRGGNTH	BBPAAALPBB
G	heavy	Lama.glama	Al_IGHV3-3*01_VHH	94.5	Al_IGHV	-1	H3	17	H3-17-*	-1	AANPNPSGSSVYRRNDY	BBLPBAPGABAAAABAB
H	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	46.2	H1	13	H1-13-1	11	AASGIIFRELGID	PBBLBPAAABPBB
H	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	55.6	H2	9	H2-9-1	9	SIASAGMTN	BBPAALPBB
H	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV	-1	H3	9	H3-9-*	-1	HTLPRFSHL	BBBABABPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019