PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5O04

#CDRs = 3; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	92.3	H1	13	H1-13-*	-1	AASGSIFSIYAMG	BBBGPPBABBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	66.7	H2	9	H2-9-1	11	SISSGGGTN	BBBAALPBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	97.3	Al_IGHV	-1	H3	14	H3-14-*	-1	KREDYSAYAPPSGS	BBBBBBADBPPBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	92.3	H1	13	H1-13-*	-1	AASGSIFSIYAMG	BBBGPPBABBBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	66.7	H2	9	H2-9-1	11	SISSGGGTN	BBBAALPBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	97.3	Al_IGHV	-1	H3	14	H3-14-*	-1	KREDYSAYAPPSGS	BBBBBBADBPPBBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	30.8	H1	13	H1-13-2	29	TAPRIIFFMYDVG	BPPPPPAAAPPBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	44.4	H2	9	H2-9-1	18	QINSDVSTK	BBPAALPBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV	-1	H3	9	H3-9-*	-1	NVRRASADY	BBBBGAPBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	30.8	H1	13	H1-13-2	29	TAPRIIFFMYDVG	BPPPBPAAAPPBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	44.4	H2	9	H2-9-1	18	QINSDVSTK	BBPAALPBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV	-1	H3	9	H3-9-*	-1	NVRRASADY	BBBBGAPBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019