PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5MUB

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	PBBLBPAAAPPBB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	12	EIRNKVNNHATN	BBPPAADLLPBB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	33	RASESVDNYGISSMN	BBABPAPBGAPPPBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	10	YAASKQGS	BLLDPBPP
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	QQSKGVPYT	BBDABPpPB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	PBBLBPAAAPPBB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	12	EIRNKVNNHATN	BBPPAADLLPBB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	33	RASESVDNYGISSMN	BBABPAPBGAPPPBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	10	YAASKQGS	BLLDPBPP
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQSKGVPYT	BBDABPpPB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	PBBLBPAAAPPBB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	12	EIRNKVNNHATN	BBPPAADLLPBB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	33	RASESVDNYGISSMN	BBABPAPBGAPPPBB
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	10	YAASKQGS	BLLDPBPP
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQSKGVPYT	BBDABPpPB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	PBBLBPAAAPPBB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	12	EIRNKVNNHATN	BBPPAADLLPBB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	33	RASESVDNYGISSMN	BBABPAPBGAPPPBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	10	YAASKQGS	BLLDPBPP
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	QQSKGVPYT	BBDABPpPB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	PBBLBPAAAPPBB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	12	EIRNKVNNHATN	BBPPAADLLPBB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	33	RASESVDNYGISSMN	BBABPAPBGAPPPBB
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	10	YAASKQGS	BLLDPBPP
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	QQSKGVPYT	BBDABPpPB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	PBBLBPAAAPPBB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	12	EIRNKVNNHATN	BBPPAADLLPBB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	33	RASESVDNYGISSMN	BBABPAPBGAPPPBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	10	YAASKQGS	BLLDPBPP
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	QQSKGVPYT	BBDABPpPB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	PBBLBPAAAPPBB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	12	EIRNKVNNHATN	BBPPAADLLPBB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	33	RASESVDNYGISSMN	BBABPAPBGAPPPBB
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	10	YAASKQGS	BLLDPBPP
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	QQSKGVPYT	BBDABPpPB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	PBBLBPAAAPPBB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	12	EIRNKVNNHATN	BBPPAADLLPBB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	33	RASESVDNYGISSMN	BBABPAPBGAPPPBB
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	10	YAASKQGS	BLLDPBPP
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQSKGVPYT	BBDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019