PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5MP1

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV1-81*01	76.9	H1	13	H1-13-1	9	KASGYIFTDYVIS	PPBLBPAAABPPB
C	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV1-81*01	80	H2	10	H2-10-1	10	EIFPRSGSTY	BBPAADLPBB
C	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV	-1	H3	13	H3-13-*	-1	ARDYYGTSFAMDY	BPBPPLDALBPAB
D	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L1	17	L1-17-*	-1	KSSQSLLNSRTRKNYLA	BBABPDPBAPGAPPPBB
D	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L2	8	L2-8-1	10	YWASTRES	BLGDPPPP
D	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV	-1	L3	8	L3-8-1	12	KQSFYLRT	BPDABGBB
F	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV1-81*01	76.9	H1	13	H1-13-1	9	KASGYIFTDYVIS	PPBLBPAAABPBB
F	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV1-81*01	80	H2	10	H2-10-1	10	EIFPRSGSTY	BBPAADLPBB
F	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV	-1	H3	13	H3-13-*	-1	ARDYYGTSFAMDY	BPBPPLDALBPAB
G	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L1	17	L1-17-1	36	KSSQSLLNSRTRKNYLA	BBABPDPBAPAAPBPBB
G	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L2	8	L2-8-1	8	YWASTRES	BLLDPPPP
G	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV	-1	L3	8	L3-8-1	14	KQSFYLRT	BPDABGBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV1-81*01	76.9	H1	13	H1-13-1	9	KASGYIFTDYVIS	PPBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV1-81*01	80	H2	10	H2-10-1	10	EIFPRSGSTY	BBPAADLPBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV	-1	H3	13	H3-13-*	-1	ARDYYGTSFAMDY	BPBPPLDALBPAB
J	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV1-81*01	76.9	H1	13	H1-13-1	10	KASGYIFTDYVIS	PPBLBPAAABPBB
J	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV1-81*01	80	H2	10	H2-10-1	10	EIFPRSGSTY	BBPAADLPBB
J	heavy	Mus.musculus	Mo_IGHV1-81*01	86.3	Mo_IGHV	-1	H3	13	H3-13-*	-1	ARDYYGTSFAMDY	BPBPPLDALBPAB
K	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L1	17	L1-17-1	37	KSSQSLLNSRTRKNYLA	BBABPDBBAPABBBPBB
K	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L2	8	L2-8-1	9	YWASTRES	BLGDPPPP
K	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV	-1	L3	8	L3-8-1	14	KQSFYLRT	BPDABGBB
L	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L1	17	L1-17-*	-1	KSSQSLLNSRTRKNYLA	BBABPAPBAPGPBPPBB
L	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L2	8	L2-8-1	8	YWASTRES	BLLDPPPP
L	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV	-1	L3	8	L3-8-1	14	KQSFYLRT	BPDABGBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019