PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5KOV

#CDRs = 6; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	84.6	H1	13	H1-13-1	22	TVSGFSLIDYGVH	BPBLBPAAABPBP
C	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	88.9	H2	9	H2-9-1	13	VIWTGGSTD	BBBAALPBB
C	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV	-1	H3	11	H3-11-*	-1	GRPYYGNVMDY	BPPBLGAPBAB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L1	11	L1-11-2	26	RASQDISNYLN	BBAPPALLAPB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L2	8	L2-8-1	12	YYTSRLHS	BLLDBPPP
C	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQGNTFPPT	BBDABPpPB
E	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	84.6	H1	13	H1-13-1	22	TVSGFSLIDYGVH	BBBLBPAAABPBP
E	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	88.9	H2	9	H2-9-1	14	VIWTGGSTD	BBBAALPBB
E	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV	-1	H3	11	H3-11-cis6-*	-1	GRPYYGNVMDY	BPPBLbLPPAB
E	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L1	11	L1-11-2	23	RASQDISNYLN	BBAPPALLPBB
E	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L2	8	L2-8-1	15	YYTSRLHS	BLLDBPPP
E	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	9	QQGNTFPPT	BBDABPpPB
I	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	84.6	H1	13	H1-13-1	21	TVSGFSLIDYGVH	BBBLBPAAABPBP
I	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	88.9	H2	9	H2-9-1	14	VIWTGGSTD	BBBAALPBB
I	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV	-1	H3	11	H3-11-*	-1	GRPYYGNVMDY	BPPBLBAPPAB
I	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L1	11	L1-11-*	-1	RASQDISNYLN	BBAPPPALAPB
I	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L2	8	L2-8-1	13	YYTSRLHS	BLLDBPPP
I	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	8	QQGNTFPPT	BBDABPpPB
K	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	84.6	H1	13	H1-13-1	21	TVSGFSLIDYGVH	BPBLBPAAABPBP
K	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	88.9	H2	9	H2-9-1	14	VIWTGGSTD	BBBAALPBB
K	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV	-1	H3	11	H3-11-*	-1	GRPYYGNVMDY	BPPBLLDALAB
K	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L1	11	L1-11-2	22	RASQDISNYLN	BBAPPALLPBB
K	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L2	8	L2-8-1	13	YYTSRLHS	BLLDBPPP
K	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQGNTFPPT	BBDABPpPB
O	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	84.6	H1	13	H1-13-1	22	TVSGFSLIDYGVH	BBBLBPAAABPBP
O	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	88.9	H2	9	H2-9-1	14	VIWTGGSTD	BBBAALPBB
O	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV	-1	H3	11	H3-11-cis6-*	-1	GRPYYGNVMDY	BPPBLdAPBAB
O	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L1	11	L1-11-2	30	RASQDISNYLN	BBAPPALLAPB
O	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L2	8	L2-8-1	13	YYTSRLHS	BLLDBPPP
O	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV	-1	L3	9	L3-9-2	20	QQGNTFPPT	BPDABAPPB
Q	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	84.6	H1	13	H1-13-2	32	TVSGFSLIDYGVH	BPDAPPAAABBBP
Q	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV	-1	H3	11	H3-11-*	-1	GRPYYGNVMDY	BPPBLBAPBAB
Q	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L1	11	L1-11-*	-1	RASQDISNYLN	APAABBALPBB
Q	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L2	8	L2-8-2	33	YYTSRLHS	BLLBBPPA
U	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	84.6	H1	13	H1-13-1	22	TVSGFSLIDYGVH	BPBLBPAAABPBP
U	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	88.9	H2	9	H2-9-1	14	VIWTGGSTD	BBBAALPBB
U	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV	-1	H3	11	H3-11-*	-1	GRPYYGNVMDY	BPPBLGAPBAB
U	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L1	11	L1-11-*	-1	RASQDISNYLN	BBAPPPALAPB
U	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L2	8	L2-8-1	13	YYTSRLHS	BLLDBPPP
U	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	QQGNTFPPT	BBDABPpPB
W	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	84.6	H1	13	H1-13-1	22	TVSGFSLIDYGVH	BBBLBBAAABPBP
W	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV2-2*01	88.9	H2	9	H2-9-*	-1	VIWTGGSTD	BBPPLGLPB
W	heavy	Mus.musculus	Mo_IGHV2-2*01	95.8	Mo_IGHV	-1	H3	11	H3-11-*	-1	GRPYYGNVMDY	BPPBLBAPBAB
W	kappa	Mus.musculus	Mo_IGKV10-96*01	100	Mo_IGKV10-96*01	100	L1	11	L1-11-*	-1	RASQDISNYLN	PBABPBBLAPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019