PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5JQD

#CDRs = 6; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	83.3	L1	12	L1-12-1	37	RASQSLSSKYLA	BBABPBPAPLBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L2	8	L2-8-1	8	YGASSRAT	BLLDPPPP
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	23	QQYDGVPRT	BBDABBpPP
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	83.3	L1	12	L1-12-cis8-*	-1	RASQSLSSKYLA	BBABPBBpLPBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L2	8	L2-8-4	15	YGASSRAT	BGDDPPPP
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	9	QQYDGVPRT	BBDABBpPB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	70	H2	10	H2-10-1	22	GITGMFGTAN	BBPAADLPBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	95.9	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARGLYYYESSLDY	BBBDBABPBPPAB
D	heavy	Homo.sapiens	Hu_IGHV1-69*01	95.9	CDRLenMismatch	-1	H1	16	H1-16-*	-1	RASGGTGGTFSAYAFT	BBPGAAPPPAAAPPBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*01	95.9	Hu_IGHV1-69*01	70	H2	10	H2-10-1	22	GITGMFGTAN	BBPAAALPBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*01	95.9	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARGLYYYESSLDY	BBBDBABPBPPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019