PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5JOP

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	kappa	Mus.musculus	Mo_IGKV1-117*01	87	Mo_IGKV1-117*01	75	L1	16	L1-16-1	8	RSSQTILHSDGYTYLE	BBABPAPPAALPBPBB
D	kappa	Mus.musculus	Mo_IGKV1-117*01	87	Mo_IGKV1-117*01	62.5	L2	8	L2-8-1	5	YRVYKRFS	BLLDPPPP
D	kappa	Mus.musculus	Mo_IGKV1-117*01	87	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	FQGSYVPRT	BBDABBpPB
E	heavy	Mus.musculus	Mo_IGHV1-22*01	87.7	Mo_IGHV1-22*01	61.5	H1	13	H1-13-1	9	EASGYIFTEYYIH	PBBLBPAAABPBB
E	heavy	Mus.musculus	Mo_IGHV1-22*01	87.7	Mo_IGHV1-22*01	30	H2	10	H2-10-1	10	YVHPKTGDVI	BBPAADLPBB
E	heavy	Mus.musculus	Mo_IGHV1-22*01	87.7	Mo_IGHV	-1	H3	5	H3-5-*	-1	ARWDS	BPADB
H	heavy	Mus.musculus	Mo_IGHV1-22*01	87.7	Mo_IGHV1-22*01	61.5	H1	13	H1-13-1	8	EASGYIFTEYYIH	PPBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV1-22*01	87.7	Mo_IGHV1-22*01	30	H2	10	H2-10-1	10	YVHPKTGDVI	BBPAADLPBB
H	heavy	Mus.musculus	Mo_IGHV1-22*01	87.7	Mo_IGHV	-1	H3	5	H3-5-*	-1	ARWDS	BPADB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	87	Mo_IGKV1-117*01	75	L1	16	L1-16-1	8	RSSQTILHSDGYTYLE	BBABPAPPAALPBPBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	87	Mo_IGKV1-117*01	62.5	L2	8	L2-8-1	6	YRVYKRFS	BLGDPPPP
L	kappa	Mus.musculus	Mo_IGKV1-117*01	87	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	FQGSYVPRT	BBDABBpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019