PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5FUU

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	83.3	Hu_IGHV3-30*01	46.2	H1	13	H1-13-1	39	VVSDFPFSKYPMY	BBPLBAGAABPBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	83.3	Hu_IGHV3-30*01	30	H2	10	H2-10-2	18	AISGDAWHVV	BBPADLDBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	83.3	Hu_IGHV	-1	H3	28	H3-28-*	-1	ARMFQESGPPRLDRWSGRNYYYYSGMDV	BBPAPPBPPPBPPAAALPPPBBBBPBDB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*01	89.9	Hu_IGKV2D-29*01	68.8	L1	16	L1-16-1	12	KSSESLRQSNGKTSLY	PBABPAPPAALBBPBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*01	89.9	Hu_IGKV2D-29*01	87.5	L2	8	L2-8-*	-1	FEVSNRFS	DBPLBPPP
L	kappa	Homo.sapiens	Hu_IGKV2D-29*01	89.9	Hu_IGKV	-1	L3	9	L3-9-cis7-1	9	MQSKDFPLT	BBDABPpPB
M	heavy	Homo.sapiens	Hu_IGHV3-30*01	83.3	Hu_IGHV3-30*01	46.2	H1	13	H1-13-1	15	VVSDFPFSKYPMY	BBBLBPAADBPBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*01	83.3	Hu_IGHV3-30*01	30	H2	10	H2-10-2	17	AISGDAWHVV	BBPAALDPBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*01	83.3	Hu_IGHV	-1	H3	28	H3-28-*	-1	ARMFQESGPPRLDRWSGRNYYYYSGMDV	BBPAPPBPPPPPPABLALLPBPBBPBDB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*01	89.9	Hu_IGKV2D-29*01	68.8	L1	16	L1-16-1	21	KSSESLRQSNGKTSLY	BBABPDPPAALBPBBB
N	kappa	Homo.sapiens	Hu_IGKV2D-29*01	89.9	Hu_IGKV2D-29*01	87.5	L2	8	L2-8-1	23	FEVSNRFS	BLGAPPPP
N	kappa	Homo.sapiens	Hu_IGKV2D-29*01	89.9	Hu_IGKV	-1	L3	9	L3-9-cis7-1	10	MQSKDFPLT	BPDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019