PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5F3H

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV3-23*03	100	H1	13	H1-13-1	11	AASGFTFSSYAMS	PPBLBPAADBPBB
A	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV3-23*03	60	H2	10	H2-10-2	11	TISSGGSYTS	BBPAALABBB
A	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV	-1	H3	9	H3-9-*	-1	AKQDYAMNY	BPBBABPPG
B	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	100	L1	11	L1-11-1	10	KASQDVSTAVA	BPABPDGDBBB
B	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	100	L2	8	L2-8-1	8	YSASYRYT	BLLDPPPP
B	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	21	QQHYSTPWT	BBAABPpPB
C	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV3-23*03	100	H1	13	H1-13-1	10	AASGFTFSSYAMS	PPBLBPAADBPBB
C	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV3-23*03	60	H2	10	H2-10-2	11	TISSGGSYTS	BBPAALABBB
C	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV	-1	H3	9	H3-9-*	-1	AKQDYAMNY	BPBBABPPG
D	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	100	L1	11	L1-11-1	9	KASQDVSTAVA	BPABPDGDPBB
D	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	100	L2	8	L2-8-1	11	YSASYRYT	BLLDPPPP
D	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	15	QQHYSTPWT	BBDABPpPB
E	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV3-23*03	100	H1	13	H1-13-1	10	AASGFTFSSYAMS	PPBLBPAADBPBB
E	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV3-23*03	60	H2	10	H2-10-2	11	TISSGGSYTS	BBPAALABBB
E	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV	-1	H3	9	H3-9-2	24	AKQDYAMNY	BPBBABPAB
F	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	100	L1	11	L1-11-1	10	KASQDVSTAVA	BPABPDGDPBB
F	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	100	L2	8	L2-8-1	7	YSASYRYT	BLLDPPPP
F	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	23	QQHYSTPWT	BBDABPpPB
G	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV3-23*03	100	H1	13	H1-13-1	11	AASGFTFSSYAMS	PPBLBPAADBPBB
G	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV3-23*03	60	H2	10	H2-10-2	11	TISSGGSYTS	BBPAALABBB
G	heavy	Mus.musculus	Hu_IGHV3-23*03	98.6	Hu_IGHV	-1	H3	9	H3-9-*	-1	AKQDYAMNY	BPBBABPPG
H	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	100	L1	11	L1-11-1	16	KASQDVSTAVA	PBABPAGDPBB
H	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV6-17*01	100	L2	8	L2-8-1	9	YSASYRYT	BLLDPPPP
H	kappa	Mus.musculus	Hu_IGKV1D-39*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	15	QQHYSTPWT	BPDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019