PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5DQ9

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-6*01	93.2	Mo_IGHV5-6*01	76.9	H1	13	H1-13-4	24	AGSGITFSGYGMS	BPBLBPAPLBPBB
A	heavy	Mus.musculus	Mo_IGHV5-6*01	93.2	Mo_IGHV5-6*01	70	H2	10	H2-10-2	12	LISNGGSYAY	BBPAALABBB
A	heavy	Mus.musculus	Mo_IGHV5-6*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARHKGLRGGTNAMDY	BPPPDPPLGPBPPAB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV3-5*01	93.3	L1	15	L1-15-1	10	RASETVDSYGNSFMH	BPABPDPBLLBBBBB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV3-5*01	100	L2	8	L2-8-1	8	YRASNLES	BLLDBPPP
B	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	6	QQSNEDPRT	BBDABPpPB
C	heavy	Mus.musculus	Mo_IGHV5-6*01	93.2	Mo_IGHV5-6*01	76.9	H1	13	H1-13-4	24	AGSGITFSGYGMS	BPBLBPAPLBPBB
C	heavy	Mus.musculus	Mo_IGHV5-6*01	93.2	Mo_IGHV5-6*01	70	H2	10	H2-10-2	11	LISNGGSYAY	BBPAALABBB
C	heavy	Mus.musculus	Mo_IGHV5-6*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARHKGLRGGTNAMDY	BPPPDPPLGPBPPAB
D	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV3-5*01	93.3	L1	15	L1-15-1	10	RASETVDSYGNSFMH	BBABPDPBLLBBBBB
D	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV3-5*01	100	L2	8	L2-8-1	8	YRASNLES	BLLDBPPP
D	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	6	QQSNEDPRT	BBDABPpPB
H	heavy	Mus.musculus	Mo_IGHV5-6*01	93.2	Mo_IGHV5-6*01	76.9	H1	13	H1-13-4	24	AGSGITFSGYGMS	BPBLBBAPLBPBB
H	heavy	Mus.musculus	Mo_IGHV5-6*01	93.2	Mo_IGHV5-6*01	70	H2	10	H2-10-2	11	LISNGGSYAY	BBPAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-6*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARHKGLRGGTNAMDY	BPPPDPPLGPBPPAB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV3-5*01	93.3	L1	15	L1-15-1	10	RASETVDSYGNSFMH	BBABPDPBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV3-5*01	100	L2	8	L2-8-1	8	YRASNLES	BLLDBPPP
L	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	6	QQSNEDPRT	BBDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019