PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5A7X

#CDRs = 6; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	81.8	L1	11	L1-11-1	24	RASESVSSDLA	BBPPPDGDPBB
C	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	100	L2	8	L2-8-1	16	YGASTRAT	BLGDBPPP
C	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	L3	11	L3-11-cis7-1	9	QQYNNWPPRYT	BBDDPBpPBPB
D	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	53.8	H1	13	H1-13-1	13	KASGDTFIRYSFT	PBBLBPAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	60	H2	10	H2-10-1	26	RIITILDVAH	BBPAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV	-1	H3	21	H3-21-*	-1	AGVYEGEADEGEYDNNGFLKH	BBBPDGPAADLPBALPAPBAB
G	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	81.8	L1	11	L1-11-1	24	RASESVSSDLA	BBPPPDGDPBB
G	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	100	L2	8	L2-8-1	16	YGASTRAT	BLGDBPPP
G	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	L3	11	L3-11-cis7-1	9	QQYNNWPPRYT	BBDDPBpPBPB
H	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	53.8	H1	13	H1-13-1	13	KASGDTFIRYSFT	PBBLBPAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	60	H2	10	H2-10-1	26	RIITILDVAH	BBPAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV	-1	H3	21	H3-21-*	-1	AGVYEGEADEGEYDNNGFLKH	BBBPDGPAADLPBALPAPBAB
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	81.8	L1	11	L1-11-1	24	RASESVSSDLA	BBPPPDGDPBB
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV3D-15*01	100	L2	8	L2-8-1	16	YGASTRAT	BLGDBPPP
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	L3	11	L3-11-cis7-1	9	QQYNNWPPRYT	BBDDPBpPBPB
L	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	53.8	H1	13	H1-13-1	13	KASGDTFIRYSFT	PBBLBPAAABBBB
L	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV1-69*02	60	H2	10	H2-10-1	26	RIITILDVAH	BBPAAALBBB
L	heavy	Homo.sapiens	Hu_IGHV1-69*02	84.9	Hu_IGHV	-1	H3	21	H3-21-*	-1	AGVYEGEADEGEYDNNGFLKH	BBBPDGPAADLPBALPAPBAB
M	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	50	L1	12	L1-12-2	35	RASQSITGNWVA	BPABPBAALPBB
M	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	37.5	L2	8	L2-8-1	6	YRGAALLG	BLLDPPPP
M	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	7	QQYDTYPGT	BPDABPpPB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H1	14	H1-14-*	-1	KAYGVNTFGLYAVN	PPPLPABAADBPBB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H2	8	H2-8-*	-1	QIWRWKSS	BBBLLBBB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	-	-1	H3	22	H3-22-*	-1	TTTSTYDKWSGLHHDGVMAFSS	BBBPDAPAAALABBLLPBPBAB
O	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	50	L1	12	L1-12-2	35	RASQSITGNWVA	BPABPBAALPBB
O	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	37.5	L2	8	L2-8-1	6	YRGAALLG	BLLDPPPP
O	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	7	QQYDTYPGT	BPDABPpPB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H1	14	H1-14-*	-1	KAYGVNTFGLYAVN	PPPLPABAADBPBB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H2	8	H2-8-*	-1	QIWRWKSS	BBBLLBBB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	-	-1	H3	22	H3-22-*	-1	TTTSTYDKWSGLHHDGVMAFSS	BBBPDAPAAALABBLLPBPBAB
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	50	L1	12	L1-12-2	35	RASQSITGNWVA	BPABPBAALPBB
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV4-92*01	37.5	L2	8	L2-8-1	6	YRGAALLG	BLLDPPPP
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	79.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	7	QQYDTYPGT	BPDABPpPB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H1	14	H1-14-*	-1	KAYGVNTFGLYAVN	PPPLPABAADBPBB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	CDRLenMismatch	-1	H2	8	H2-8-*	-1	QIWRWKSS	BBBLLBBB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	58.4	-	-1	H3	22	H3-22-*	-1	TTTSTYDKWSGLHHDGVMAFSS	BBBPDAPAAALABBLLPBPBAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019