PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4YK4

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	10	RASQSISSYLN	BBABPDGDPBB
B	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	8	YAASSLQS	BLLDPPPP
B	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-3	22	QQSYSIPLT	BPDABPpLB
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	100	Hu_IGHV4-59*01	100	H1	13	H1-13-4	23	TVSGGSISSYYWS	BPBLBBAPLBPBB
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	100	Hu_IGHV4-59*01	88.9	H2	9	H2-9-1	11	YIYYSGSTD	BBPAALPBB
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	100	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARRRSDFETVDFIYHYMDV	BPBBPBBDBAABBBBBBDB
Y	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	11	RASQSISSYLN	BPABPDGDPBB
Y	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	9	YAASSLQS	BLLDPPPP
Y	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-3	22	QQSYSIPLT	BPDABPpLB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	100	Hu_IGHV4-59*01	100	H1	13	H1-13-4	21	TVSGGSISSYYWS	BBBLBBAPLBPBB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	100	Hu_IGHV4-59*01	88.9	H2	9	H2-9-1	11	YIYYSGSTD	BBPAALPBB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	100	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARRRSDFETVDFIYHYMDV	BPBBPBBABAABBBBBBDB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019