PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4YDV

#CDRs = 5; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	87	Hu_IGKV4-1*01	75	L2	8	L2-8-1	5	YWASMRLS	BLLDPPPP
A	kappa	Homo.sapiens	Hu_IGKV4-1*01	87	Hu_IGKV	-1	L3	9	L3-9-cis7-1	20	HQYSSHPPT	BPDDPBpPB
B	heavy	Homo.sapiens	Hu_IGHV3-11*01	76.7	Hu_IGHV3-11*01	69.2	H1	13	H1-13-1	8	EASGFTFTEYYMT	BPBLBPAAABPBB
B	heavy	Homo.sapiens	Hu_IGHV3-11*01	76.7	Hu_IGHV3-11*01	40	H2	10	H2-10-2	12	YISKNGEYSK	BBPAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-11*01	76.7	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARADGLTYFSELLQYIFDL	BPBBBPBBGAPPBLBBPAB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	76.7	Hu_IGHV3-11*01	69.2	H1	13	H1-13-1	8	EASGFTFTEYYMT	BPBLBPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	76.7	Hu_IGHV3-11*01	40	H2	10	H2-10-2	12	YISKNGEYSK	BBPAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	76.7	Hu_IGHV	-1	H3	19	H3-19-*	-1	ARADGLTYFSELLQYIFDL	BPBBBPBBGAPPBLBBPAB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	87	Hu_IGKV4-1*01	75	L2	8	L2-8-1	6	YWASMRLS	BLLDPPPP
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	87	Hu_IGKV	-1	L3	9	L3-9-cis7-1	20	HQYSSHPPT	BPDDPBpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019