PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4XGZ

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
A	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
A	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
B	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
B	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
B	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB
C	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
C	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
C	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
D	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
D	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
D	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB
E	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
E	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
E	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
F	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
F	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
F	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB
G	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
G	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
G	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
H	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
H	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
I	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
I	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
I	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB
J	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
J	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
J	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
K	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
K	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
K	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
L	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
L	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBBADBBB
M	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
M	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
M	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
N	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAALPBB
N	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
N	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBBADBBB
O	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
O	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
O	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
P	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
P	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
P	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB
Q	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
Q	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
Q	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
R	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
R	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
R	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB
S	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
S	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
S	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
T	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
T	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
T	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB
U	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
U	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
U	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
V	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
V	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
V	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB
W	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	46.2	H1	13	H1-13-1	15	AASGFNVSYSSIH	PBBLBPAADBBBB
W	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-1	13	SIYSYYGYTY	BBBAAALPBB
W	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARGYYGAAMDY	BPPBPLLPBAB
X	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BDLPBAAPPBB
X	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV1D-39*01	75	L2	8	L2-8-1	6	YSASSLYS	BLGDPPPP
X	kappa	Homo.sapiens	Hu_IGKV1D-39*01	98.5	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSSSSLIT	BBBPADBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019