PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4TNW

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	PPBLBPAAABPBP
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	PPBLBPAAABPBP
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	9	KASGYSFTGYTMN	PPBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	PPBLBPAAABPBP
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	PPBLBPAAABPBP
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
K	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
K	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
K	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-*	-1	ALWYSNHWV	BBPPGABPB
L	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
L	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
L	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-*	-1	ALWYSNHWV	BBBALABPB
M	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
M	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
M	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-*	-1	ALWYSNHWV	BBPPGABPB
N	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
N	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	38	GGINNRAP	PAADPBPP
N	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	39	ALWYSNHWV	BBPPGDBPB
O	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
O	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	25	GGINNRAP	BGADPBPP
O	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	31	ALWYSNHWV	BBPPPLBBB
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	PPBLBPAAABPBP
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	9	KASGYSFTGYTMN	PPBLBPAAABPBB
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	PPBLBPAAABPBP
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	PPBLBPAAABPBP
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	10	KASGYSFTGYTMN	PPBLBPAAABPBP
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPAPPLBPALBPDB
Z	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
Z	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
Z	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBPPPLBPB
f	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
f	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
f	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	21	ALWYSNHWV	BBPPPLBPB
g	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
g	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
g	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	31	ALWYSNHWV	BBPPPLBPB
h	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
h	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
h	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-*	-1	ALWYSNHWV	BBPPGDBPB
i	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAAGPPPAAALPB
i	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
i	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-*	-1	ALWYSNHWV	BBPPAABPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019