PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4RAU

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	81.8	L1	11	L1-11-*	-1	SASQGINNYLS	BBABPPPLDPB
A	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100	L2	8	L2-8-4	18	YYTSSLHS	BGDDPPPP
A	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQFSKLPYT	BBDABPpPB
B	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	92.3	H1	13	H1-13-1	14	AASGFAFSRYDMS	PBBLBPAADBPBB
B	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	70	H2	10	H2-10-2	29	TITSGDNYTY	BBPAPLPPBB
B	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	TRQGLLYYAMDY	BBPGGADLBPAB
D	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	81.8	L1	11	L1-11-*	-1	SASQGINNYLS	BBABPPPLDPB
D	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100	L2	8	L2-8-4	18	YYTSSLHS	BGDDPPPP
D	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQFSKLPYT	BBDABPpPB
E	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	92.3	H1	13	H1-13-1	14	AASGFAFSRYDMS	PBBLBPAADBPBB
E	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	70	H2	10	H2-10-2	29	TITSGDNYTY	BBPAPLPPBB
E	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	TRQGLLYYAMDY	BBPGGADLBPAB
G	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	81.8	L1	11	L1-11-*	-1	SASQGINNYLS	BBABPPPLDPB
G	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100	L2	8	L2-8-4	21	YYTSSLHS	BGADPPPP
G	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQFSKLPYT	BBDABPpPB
H	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	92.3	H1	13	H1-13-1	14	AASGFAFSRYDMS	PBBLBPAADBPBB
H	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	70	H2	10	H2-10-2	29	TITSGDNYTY	BBPAPLPPBB
H	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	TRQGLLYYAMDY	BBPGGADLBPAB
J	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	81.8	L1	11	L1-11-*	-1	SASQGINNYLS	BBABPPPLDPB
J	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100	L2	8	L2-8-4	18	YYTSSLHS	BGDDPPPP
J	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQFSKLPYT	BBDABPpPB
K	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	92.3	H1	13	H1-13-1	14	AASGFAFSRYDMS	PBBLBPAADBPBB
K	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	70	H2	10	H2-10-2	29	TITSGDNYTY	BBPAPLPPBB
K	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	TRQGLLYYAMDY	BBPGGADGGPAB
M	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	81.8	L1	11	L1-11-*	-1	SASQGINNYLS	BBABPPPLDPB
M	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100	L2	8	L2-8-4	18	YYTSSLHS	BGDDPPPP
M	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQFSKLPYT	BBDABPpPB
N	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	92.3	H1	13	H1-13-1	14	AASGFAFSRYDMS	PBBLBPAADBPBB
N	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	70	H2	10	H2-10-2	29	TITSGDNYTY	BBPAPLPPBB
N	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	TRQGLLYYAMDY	BBPGGADLBPAB
P	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	81.8	L1	11	L1-11-*	-1	SASQGINNYLS	BBABPPPLDPB
P	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100	L2	8	L2-8-4	18	YYTSSLHS	BGDDPPPP
P	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQFSKLPYT	BBDABPpPB
Q	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	92.3	H1	13	H1-13-1	14	AASGFAFSRYDMS	PBBLBPAADBPBB
Q	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	70	H2	10	H2-10-2	29	TITSGDNYTY	BBPAPLPPBB
Q	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	TRQGLLYYAMDY	BBPGGADLBPAB
S	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	81.8	L1	11	L1-11-*	-1	SASQGINNYLS	BBABPPPLDPB
S	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100	L2	8	L2-8-4	18	YYTSSLHS	BGDDPPPP
S	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQFSKLPYT	BBDABPpPB
T	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	92.3	H1	13	H1-13-1	14	AASGFAFSRYDMS	PBBLBPAADBPBB
T	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	70	H2	10	H2-10-*	-1	TITSGDNYTY	BBPAPAPPBB
T	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	TRQGLLYYAMDY	BBPGGADLBPAB
V	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	81.8	L1	11	L1-11-*	-1	SASQGINNYLS	BBABPPPLDPB
V	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV10-94*01	100	L2	8	L2-8-4	21	YYTSSLHS	BGADPPPP
V	kappa	Mus.musculus	Mo_IGKV10-94*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQFSKLPYT	BBDABPpPB
W	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	92.3	H1	13	H1-13-1	14	AASGFAFSRYDMS	PBBLBPAADBPBB
W	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV5-9*02	70	H2	10	H2-10-2	29	TITSGDNYTY	BBPAPLPPBB
W	heavy	Mus.musculus	Mo_IGHV5-9*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	TRQGLLYYAMDY	BBPGGADLBPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019