PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4R7N

#CDRs = 6; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-1	37	AVSGYPIRFGYSWH	BPBLBPAAPGPPBB
A	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-1	9	YIHYSGYTD	BBPAALPBB
A	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
B	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-1	20	RASQSISDHLH	PBABPDGAPBB
B	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-*	-1	KYASHAIS	PPGDPPDL
B	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	10	QQGYDFPLT	BBDABPpPB
C	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-*	-1	AVSGYPIRFGYSWH	BPBLBPAAPGPPBB
C	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-1	11	YIHYSGYTD	BBPAALPBB
C	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
D	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-1	23	RASQSISDHLH	PBABPDGAPBB
D	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-cis3-*	-1	KYASHAIS	BLdDPPPP
D	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQGYDFPLT	BBDABPpPB
E	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-1	37	AVSGYPIRFGYSWH	BBBLBPAABBPPBB
E	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-1	8	YIHYSGYTD	BBPAALPBB
E	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-1	17	RASQSISDHLH	PBABPDGAPBB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-cis3-*	-1	KYASHAIS	BLdDBPPP
F	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	14	QQGYDFPLT	BPDABPpPB
G	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-1	35	AVSGYPIRFGYSWH	BPBLBPAAPGPPBB
G	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-1	8	YIHYSGYTD	BBPAALPBB
G	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
H	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-1	20	RASQSISDHLH	PBABPDGAPBB
H	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-cis3-*	-1	KYASHAIS	BLdDPPPP
H	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQGYDFPLT	BBDABPpPB
I	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-1	39	AVSGYPIRFGYSWH	BPBLBPAAPGPPBB
I	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-1	8	YIHYSGYTD	BBPAALPBB
I	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
J	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-2	30	RASQSISDHLH	PBABPBPLPBB
J	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-cis3-*	-1	KYASHAIS	BLaAPPPP
J	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQGYDFPLT	BPDABPpPB
K	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-*	-1	AVSGYPIRFGYSWH	BPBLBBAAPGPPBB
K	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-1	10	YIHYSGYTD	BBPAALPBB
K	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
L	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-1	18	RASQSISDHLH	PBABPDGAPBB
L	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-cis3-*	-1	KYASHAIS	BLdDPPBP
L	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQGYDFPLT	BBDABPpPB
M	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-1	38	AVSGYPIRFGYSWH	BPBLBPAAPGPPBB
M	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-1	8	YIHYSGYTD	BBPAALPBB
M	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
N	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-1	20	RASQSISDHLH	PBABPDGAPBB
N	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-cis3-*	-1	KYASHAIS	BLdDPPPP
N	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQGYDFPLT	BPDABPpPB
O	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-*	-1	AVSGYPIRFGYSWH	BBBLBBAAPGPBBB
O	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-1	10	YIHYSGYTD	BBPAALPBB
O	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
P	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-1	20	RASQSISDHLH	PBABPDGAPBB
P	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-cis2,3-*	-1	KYASHAIS	BbaAPPPP
P	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	10	QQGYDFPLT	BBDABPpPB
Q	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-*	-1	AVSGYPIRFGYSWH	BPBLBPAAPGPPBB
Q	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-1	19	YIHYSGYTD	BBPAPLPBB
Q	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
R	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-1	21	RASQSISDHLH	PBABPDGAPBB
R	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-cis3-*	-1	KYASHAIS	BLbDPPPP
R	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-*	-1	QQGYDFPLT	BPPBPPpPB
S	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	50	H1	14	H1-14-1	39	AVSGYPIRFGYSWH	BPBLBPAABGPPBB
S	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV4-28*01	66.7	H2	9	H2-9-*	-1	YIHYSGYTD	BBPAPAPBB
S	heavy	Homo.sapiens	Hu_IGHV4-28*01	91.8	Hu_IGHV	-1	H3	11	H3-11-*	-1	ARKDSGNYFPY	BBAGBLLBPAB
T	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	72.7	L1	11	L1-11-1	18	RASQSISDHLH	PBABPAGAPBB
T	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV6D-21*01	62.5	L2	8	L2-8-cis3-*	-1	KYASHAIS	BLbDPPDL
T	kappa	Homo.sapiens	Hu_IGKV6D-21*01	100	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQGYDFPLT	BPDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019