PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4R4B

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100	L1	11	L1-11-1	5	RASQGISSYLA	BPABPDGDPBB
A	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100	L2	8	L2-8-1	6	YAASTLQS	BLLDPPPP
A	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV	-1	L3	8	L3-8-*	-1	QHLIGLRS	BPABGALP
B	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV4-34*01	69.2	H1	13	H1-13-4	20	GVYGESLSGHYWS	PBBLBPAPLBPBB
B	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV4-34*01	66.7	H2	9	H2-9-*	-1	EIKHNGSPN	BBDBPLBPB
B	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV	-1	H3	13	H3-13-cis7,13-*	-1	ARRSNWPYLPFDP	BPBPPPaBAPPBp
C	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100	L1	11	L1-11-1	7	RASQGISSYLA	BBABPDGDPBB
C	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV	-1	L3	8	L3-8-*	-1	QHLIGLRS	BPABGALP
D	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV4-34*01	69.2	H1	13	H1-13-4	20	GVYGESLSGHYWS	PBBLBPAPLBPBB
D	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV4-34*01	66.7	H2	9	H2-9-*	-1	EIKHNGSPN	BBBAPBBPB
D	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV	-1	H3	13	H3-13-cis13-*	-1	ARRSNWPYLPFDP	BPPPAPPLLPPBp
E	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100	L1	11	L1-11-1	8	RASQGISSYLA	BBABPDGDPBB
E	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV	-1	L3	8	L3-8-*	-1	QHLIGLRS	BPABGALP
F	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV4-34*01	69.2	H1	13	H1-13-4	21	GVYGESLSGHYWS	PBBLBPAPLBPBB
F	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV4-34*01	66.7	H2	9	H2-9-*	-1	EIKHNGSPN	BBBAPBBPB
F	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV	-1	H3	13	H3-13-cis13-*	-1	ARRSNWPYLPFDP	BPPPAPPLLPPBp
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV4-34*01	69.2	H1	13	H1-13-4	19	GVYGESLSGHYWS	PBBLBPAPLBPBB
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV4-34*01	66.7	H2	9	H2-9-*	-1	EIKHNGSPN	BBDBPLBPB
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	89	Hu_IGHV	-1	H3	13	H3-13-cis7,13-*	-1	ARRSNWPYLPFDP	BPBPPPaBAPPBp
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100	L1	11	L1-11-1	6	RASQGISSYLA	BPABPDGDPBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100	L2	8	L2-8-1	5	YAASTLQS	BLLDPPPP
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV	-1	L3	8	L3-8-*	-1	QHLIGLRS	BPABGALP

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019