PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4P3D

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-9*01	89	Mo_IGHV5-9*01	76.9	H1	13	H1-13-1	7	AASGFIFSNYAMS	PBBLBPAAABPBB
A	heavy	Mus.musculus	Mo_IGHV5-9*01	89	Mo_IGHV5-9*01	80	H2	10	H2-10-2	14	TISGGGRNIY	BBPAALDBBB
A	heavy	Mus.musculus	Mo_IGHV5-9*01	89	Mo_IGHV	-1	H3	11	H3-11-*	-1	SRENYGSSFTY	BPPBPLBABAB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.5	Mo_IGKV1-117*01	100	L1	16	L1-16-1	10	RSSQSIVHSNGNTYLE	BPABPDPPAALPBPPB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.5	Mo_IGKV1-117*01	100	L2	8	L2-8-1	7	YKVSNRFS	BLLDPPPP
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	FQGSHAPYT	BBDABPpPB
H	heavy	Mus.musculus	Mo_IGHV5-9*01	89	Mo_IGHV5-9*01	76.9	H1	13	H1-13-1	8	AASGFIFSNYAMS	PBBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV5-9*01	89	Mo_IGHV5-9*01	80	H2	10	H2-10-2	14	TISGGGRNIY	BBPAALDBBB
H	heavy	Mus.musculus	Mo_IGHV5-9*01	89	Mo_IGHV	-1	H3	11	H3-11-*	-1	SRENYGSSFTY	BPPBPLBABAB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.5	Mo_IGKV1-117*01	100	L1	16	L1-16-1	9	RSSQSIVHSNGNTYLE	BPABPDPPAALPBPBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.5	Mo_IGKV1-117*01	100	L2	8	L2-8-1	6	YKVSNRFS	BLLDBPPP
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	FQGSHAPYT	BBDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019