PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4NM8

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	89	Hu_IGHV1-3*01	84.6	H1	13	H1-13-1	11	KASGYTFTAYSMH	BBBLBPAADBPBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	89	Hu_IGHV1-3*01	60	H2	10	H2-10-1	17	WINTAIGNTQ	BBPAAALPBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	89	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARGASWDARGWSGY	BPPABPLLPBPBAB
I	heavy	Homo.sapiens	Hu_IGHV1-3*01	89	Hu_IGHV1-3*01	84.6	H1	13	H1-13-1	11	KASGYTFTAYSMH	BBBLBPAADBPBB
I	heavy	Homo.sapiens	Hu_IGHV1-3*01	89	Hu_IGHV1-3*01	60	H2	10	H2-10-1	17	WINTAIGNTQ	BBPAAALPBB
I	heavy	Homo.sapiens	Hu_IGHV1-3*01	89	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARGASWDARGWSGY	BPPABPLLPBPBAB
J	heavy	Homo.sapiens	Hu_IGHV1-3*01	89	Hu_IGHV1-3*01	84.6	H1	13	H1-13-1	11	KASGYTFTAYSMH	BBBLBPAADBPBB
J	heavy	Homo.sapiens	Hu_IGHV1-3*01	89	Hu_IGHV1-3*01	60	H2	10	H2-10-1	17	WINTAIGNTQ	BBPAAALPBB
J	heavy	Homo.sapiens	Hu_IGHV1-3*01	89	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARGASWDARGWSGY	BPPABPLLPBPBAB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	94.2	Hu_IGKV4-1*01	82.4	L1	17	L1-17-1	8	KSSQSVFSSSTNKNYLA	BBABPDPBAADLBPPBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	94.2	Hu_IGKV4-1*01	87.5	L2	8	L2-8-1	9	YWSSTRES	BLLDPPPP
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	9	HQYYTAPWT	BPDABPpPB
M	kappa	Homo.sapiens	Hu_IGKV4-1*01	94.2	Hu_IGKV4-1*01	82.4	L1	17	L1-17-1	8	KSSQSVFSSSTNKNYLA	BBABPDPBAADLBPPBB
M	kappa	Homo.sapiens	Hu_IGKV4-1*01	94.2	Hu_IGKV4-1*01	87.5	L2	8	L2-8-1	9	YWSSTRES	BLLDPPPP
M	kappa	Homo.sapiens	Hu_IGKV4-1*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	9	HQYYTAPWT	BPDABPpPB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	94.2	Hu_IGKV4-1*01	82.4	L1	17	L1-17-1	8	KSSQSVFSSSTNKNYLA	BBABPDPBAADLBPPBB
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	94.2	Hu_IGKV4-1*01	87.5	L2	8	L2-8-1	9	YWSSTRES	BLLDPPPP
N	kappa	Homo.sapiens	Hu_IGKV4-1*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	9	HQYYTAPWT	BPDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019