PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4GMS

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S12*01	86.3	Mo_IGHV1S12*01	69.2	H1	13	H1-13-1	11	KATGYTFSSYWIE	BPBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV1S12*01	86.3	Mo_IGHV1S12*01	50	H2	10	H2-10-1	14	EILPEIGMTN	BBPAAALPBB
H	heavy	Mus.musculus	Mo_IGHV1S12*01	86.3	Mo_IGHV	-1	H3	11	H3-11-*	-1	ARPYDYSWFAY	BBPADDDPPDB
I	heavy	Mus.musculus	Mo_IGHV1S12*01	86.3	Mo_IGHV1S12*01	69.2	H1	13	H1-13-1	11	KATGYTFSSYWIE	BPBLBPAAABPBB
I	heavy	Mus.musculus	Mo_IGHV1S12*01	86.3	Mo_IGHV1S12*01	50	H2	10	H2-10-1	14	EILPEIGMTN	BBPAAALPBB
I	heavy	Mus.musculus	Mo_IGHV1S12*01	86.3	Mo_IGHV	-1	H3	11	H3-11-*	-1	ARPYDYSWFAY	BBPADDDPPDB
J	heavy	Mus.musculus	Mo_IGHV1S12*01	86.3	Mo_IGHV1S12*01	69.2	H1	13	H1-13-1	11	KATGYTFSSYWIE	BPBLBPAAABPBB
J	heavy	Mus.musculus	Mo_IGHV1S12*01	86.3	Mo_IGHV1S12*01	50	H2	10	H2-10-1	14	EILPEIGMTN	BBPAAALPBB
J	heavy	Mus.musculus	Mo_IGHV1S12*01	86.3	Mo_IGHV	-1	H3	11	H3-11-*	-1	ARPYDYSWFAY	BBPADDDPPDB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	94.2	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	14	KASQNVDTNVA	BPABPDGAPBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	94.2	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	11	YSASNRYS	BLLDBPPP
L	kappa	Mus.musculus	Mo_IGKV6-15*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYNSYPYT	BPAABPpPB
M	kappa	Mus.musculus	Mo_IGKV6-15*01	94.2	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	15	KASQNVDTNVA	BPABPDGAPBB
M	kappa	Mus.musculus	Mo_IGKV6-15*01	94.2	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	11	YSASNRYS	BLLDBPPP
M	kappa	Mus.musculus	Mo_IGKV6-15*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYNSYPYT	BPAABPpPB
N	kappa	Mus.musculus	Mo_IGKV6-15*01	94.2	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	14	KASQNVDTNVA	BPABPDGAPBB
N	kappa	Mus.musculus	Mo_IGKV6-15*01	94.2	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	11	YSASNRYS	BLLDBPPP
N	kappa	Mus.musculus	Mo_IGKV6-15*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYNSYPYT	BPAABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019