PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4FQR

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
a	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
a	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
a	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLPBPABPALPPPAB
b	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
b	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
b	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
c	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
c	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
c	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLBBPABPALPPPAB
d	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
d	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
d	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
e	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
e	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
e	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLBBPABPALPPPAB
f	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
f	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
f	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
g	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
g	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
g	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLBBPABPALPPPAB
h	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
h	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
h	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
i	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
i	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
i	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLPBPABPALPPPAB
j	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
j	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
j	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
k	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
k	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
k	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLBBPABPALPPPAB
l	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
l	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
l	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
m	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
m	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
m	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLBBPABPALPPPAB
n	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
n	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
n	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
o	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
o	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
o	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLBBPABPALPPPAB
p	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
p	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
p	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
q	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
q	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
q	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLBBPABPALPPPAB
r	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
r	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
r	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
s	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
s	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
s	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLPBPABPALPPPAB
t	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
t	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
t	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
u	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
u	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
u	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLBBPABPALPPPAB
v	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
v	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
v	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB
w	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	CDRLenMismatch	-1	H1	18	H1-18-*	-1	VGSGSSFGESTLSYYAVS	BPBGBBPLLPBAAABPBB
w	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	H2	10	H2-10-5	12	IINAGGGDID	BBPAALBLPB
w	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV	-1	H3	26	H3-26-*	-1	AKHMSMQQVVSAGWERADLVGDAFDV	BPPAPPDBBAADLBBPABPALPPPAB
x	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	72.7	L1	11	L1-11-1	5	QASQDIRKFLN	BPABPDGDPBB
x	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	9	YDASNLQR	BLLDPPPP
x	kappa	Homo.sapiens	Hu_IGKV1D-33*01	88.4	Hu_IGKV	-1	L3	9	L3-9-cis7-1	8	QQYDGLPFT	BBDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019