PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4F9P

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV1-54*01	90.4	Mo_IGHV1-54*01	84.6	H1	13	H1-13-1	16	KASGYAFTSYLIH	PBBLBPAAABPBB
C	heavy	Mus.musculus	Mo_IGHV1-54*01	90.4	Mo_IGHV1-54*01	60	H2	10	H2-10-3	29	VINPRSGDSH	BBPPLDLBBB
C	heavy	Mus.musculus	Mo_IGHV1-54*01	90.4	Mo_IGHV	-1	H3	8	H3-8-cis3,7-*	-1	ARSDYGAY	BBbLDDdB
C	kappa	Mus.musculus	Mo_IGKV5-43*01	94.2	Mo_IGKV5-43*01	100	L1	11	L1-11-1	21	RASQSISNNLH	BPAPPDGAPBB
C	kappa	Mus.musculus	Mo_IGKV5-43*01	94.2	Mo_IGKV5-43*01	87.5	L2	8	L2-8-1	27	KYASQSIF	BLLDPPPP
C	kappa	Mus.musculus	Mo_IGKV5-43*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	18	QQSNSWPHT	BPAABPpPB
D	heavy	Mus.musculus	Mo_IGHV1-54*01	90.4	Mo_IGHV1-54*01	84.6	H1	13	H1-13-1	14	KASGYAFTSYLIH	PBBLBPAAABPBB
D	heavy	Mus.musculus	Mo_IGHV1-54*01	90.4	Mo_IGHV1-54*01	60	H2	10	H2-10-3	26	VINPRSGDSH	BBBPLDLBBB
D	heavy	Mus.musculus	Mo_IGHV1-54*01	90.4	Mo_IGHV	-1	H3	8	H3-8-cis3-*	-1	ARSDYGAY	BBbLDLAB
D	kappa	Mus.musculus	Mo_IGKV5-43*01	94.2	Mo_IGKV5-43*01	100	L1	11	L1-11-1	23	RASQSISNNLH	BPAPPDGAPBB
D	kappa	Mus.musculus	Mo_IGKV5-43*01	94.2	Mo_IGKV5-43*01	87.5	L2	8	L2-8-1	28	KYASQSIF	BLLDPBPP
D	kappa	Mus.musculus	Mo_IGKV5-43*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-1	18	QQSNSWPHT	BBAABBpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019