PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3Q6F

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	13	GGNNIANKNVH	PBPLAAABPBB
A	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	22	YYDDDRPS	BLGDPBPP
A	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	18	QVWDSNSDHVV	BBBPAADLBPB
B	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	13	TASGFSFDDSTMH	BBBLBPAAABPBB
B	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	20	LISWNGGRTY	BBPADLAPBB
B	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BPBALPBBBBADAGPBBBPBPDB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	13	GGNNIANKNVH	PBPLAAABPBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	21	YYDDDRPS	BLGDPBPP
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	18	QVWDSNSDHVV	BBBPAADLBPB
D	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	14	TASGFSFDDSTMH	BBBLBPAAABPBB
D	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	20	LISWNGGRTY	BBPADLAPBB
D	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BPBALPBBBBADDGPBBBPBPDB
E	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	14	GGNNIANKNVH	PBPLAAABPBB
E	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	21	YYDDDRPS	BLGDPBPP
E	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	18	QVWDSNSDHVV	BBBPAADLBPB
F	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	14	TASGFSFDDSTMH	BBBLBPAAABPBB
F	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	20	LISWNGGRTY	BBPADLAPBB
F	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BPBALPBBBBADDGPBBBPBPDB
G	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	13	GGNNIANKNVH	PBPLAAABPBB
G	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	21	YYDDDRPS	BLGDPBPP
G	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	18	QVWDSNSDHVV	BBBPAADLBPB
H	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	14	TASGFSFDDSTMH	BBBLBPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	21	LISWNGGRTY	BBPADLAPBB
H	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BPBALPBBBBADAGPBBBPBPDB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	13	GGNNIANKNVH	PBPLAAABPBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	20	YYDDDRPS	BLGDPBPP
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	17	QVWDSNSDHVV	BBBPAADLBPB
J	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	14	TASGFSFDDSTMH	BBBLBPAAABPBB
J	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	21	LISWNGGRTY	BBPADLAPBB
J	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BBBALPBBBBADAGPBBBPBPDB
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	13	GGNNIANKNVH	PBPLAAABPBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	21	YYDDDRPS	BLGDPBPP
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	17	QVWDSNSDHVV	BBBPAADLBPB
L	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	14	TASGFSFDDSTMH	BBBLBPAAABPBB
L	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	21	LISWNGGRTY	BBPADLAPBB
L	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BPBALPBBBBADAGPBBBPBPDB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019