PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3PIQ

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	11	TASGFSFDDSTMH	PBBLBPAADBPBB
A	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	22	LISWNGGRTY	BBPADLABBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	18	GGNNIANKNVH	PBPLAAAPPBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	17	YYDDDRPS	BLLDPBPP
B	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	25	QVWDSNSDHVV	BBBPAADLBBB
C	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	18	TASGFSFDDSTMH	PBBLBPAADPPBB
C	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	21	LISWNGGRTY	BBPADLABBB
C	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BPBALPBBBBDAAGPBBBBBPDB
D	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	18	GGNNIANKNVH	PBPLAAAPPPB
D	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	21	YYDDDRPS	BLGDPBPP
D	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	26	QVWDSNSDHVV	BBBPAAALBBP
E	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	10	TASGFSFDDSTMH	BBBLBPAADBPBB
E	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	13	LISWNGGRTY	BBPADLABBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	11	GGNNIANKNVH	PBPLAAAPPPB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	16	YYDDDRPS	BLLDPPPP
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	22	QVWDSNSDHVV	BBBBDAALBPB
G	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	22	TASGFSFDDSTMH	PBBLBPAADBBPB
G	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	19	LISWNGGRTY	BBPADLABBP
G	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BBBALPBPBBADDGPBBBBBPDB
H	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	13	TASGFSFDDSTMH	PBBLBPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	20	LISWNGGRTY	BBPADLABBB
H	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BBBALPBBBBADDGPBPBBBPDB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	15	GGNNIANKNVH	BBPLAAAPPBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	22	YYDDDRPS	BLLDPBPB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	30	QVWDSNSDHVV	BBBPAADLBBP
J	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	76.9	H1	13	H1-13-1	16	TASGFSFDDSTMH	PBBLBPAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV3-43*01	80	H2	10	H2-10-2	21	LISWNGGRTY	BBPADLABBB
J	heavy	Homo.sapiens	Hu_IGHV3-43*01	93.2	Hu_IGHV	-1	H3	23	H3-23-*	-1	AKDKGDSDYDYNLGYSYFYYMDG	BBBALPBPBBADDGPBBBBBPDB
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	23	GGNNIANKNVH	BBPLAAABPBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	24	YYDDDRPS	BLGDBBPP
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	24	QVWDSNSDHVV	BBBPDADLBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	72.7	L1	11	L1-11-3	14	GGNNIANKNVH	BBPLAAABPPB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	24	YYDDDRPS	BLGDPBPP
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	27	QVWDSNSDHVV	BBBPDADLBPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019