PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3OPZ

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-63*02	94.4	Mo_IGHV1-63*02	80	H2	10	H2-10-3	36	DIYLGGGYIN	BBBPLLLPBB
H	heavy	Mus.musculus	Mo_IGHV1-63*02	94.4	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGHYDGSYFDY	BPPPAPLLPPAP
I	heavy	Mus.musculus	Mo_IGHV1-63*02	94.4	Mo_IGHV1-63*02	76.9	H1	13	H1-13-*	-1	KAVGYTFTYDWIG	BPBGPPPABBPBB
I	heavy	Mus.musculus	Mo_IGHV1-63*02	94.4	Mo_IGHV1-63*02	80	H2	10	H2-10-3	36	DIYLGGGYIN	BBBPLLLPBB
I	heavy	Mus.musculus	Mo_IGHV1-63*02	94.4	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGHYDGSYFDY	BPPPAPLLPPAP
J	heavy	Mus.musculus	Mo_IGHV1-63*02	94.4	Mo_IGHV1-63*02	76.9	H1	13	H1-13-cis7-*	-1	KAVGYTFTYDWIG	BPBLBGdABBPBB
J	heavy	Mus.musculus	Mo_IGHV1-63*02	94.4	Mo_IGHV1-63*02	80	H2	10	H2-10-3	36	DIYLGGGYIN	BBBPLLLPBB
J	heavy	Mus.musculus	Mo_IGHV1-63*02	94.4	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGHYDGSYFDY	BPPPAPLLPPAP
L	kappa	Mus.musculus	Mo_IGKV4-80*01	88.4	Mo_IGKV4-80*01	90	L1	10	L1-10-1	12	SASSSVSHMH	BPABPBABBB
L	kappa	Mus.musculus	Mo_IGKV4-80*01	88.4	Mo_IGKV4-80*01	75	L2	8	L2-8-1	12	YITSYLAS	BLLDPPPP
L	kappa	Mus.musculus	Mo_IGKV4-80*01	88.4	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	HQWSTFPST	BBBDBPpPB
M	kappa	Mus.musculus	Mo_IGKV4-80*01	88.4	Mo_IGKV4-80*01	90	L1	10	L1-10-1	12	SASSSVSHMH	BPABPBABBB
M	kappa	Mus.musculus	Mo_IGKV4-80*01	88.4	Mo_IGKV4-80*01	75	L2	8	L2-8-1	12	YITSYLAS	BLLDPPPP
M	kappa	Mus.musculus	Mo_IGKV4-80*01	88.4	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	HQWSTFPST	BBBDBPpPB
N	kappa	Mus.musculus	Mo_IGKV4-80*01	88.4	Mo_IGKV4-80*01	90	L1	10	L1-10-1	12	SASSSVSHMH	BPABPBABBB
N	kappa	Mus.musculus	Mo_IGKV4-80*01	88.4	Mo_IGKV4-80*01	75	L2	8	L2-8-1	12	YITSYLAS	BLLDPPPP
N	kappa	Mus.musculus	Mo_IGKV4-80*01	88.4	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	HQWSTFPST	BBBDBPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019